Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq127 187 3e-42 seq60 86.0 8e-12 >seq127 Length=50345 Score = 187 bits (206), Expect = 3e-42 Identities = 587/900 (65%), Gaps = 12/900 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||||||||| || | |||| |||| ||||| || || || | | | | Sbjct 26273 TCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCGCTAGGGCAGAAGAGGGTC 26332 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| ||| || || ||||| || ||||||||| |||| ||||| || Sbjct 26333 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAC 26392 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 ||||| | | ||| ||| || ||||| ||||| || || | |||| | | Sbjct 26393 AAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAG 26452 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| | ||||| || |||| || ||||| | | || || || |||||||| ||| Sbjct 26453 ACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCC 26512 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 || || | ||||||||| |||||||| | || | || ||| |||| ||| ||||||||| Sbjct 26513 TGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGAT 26572 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA--TTGATAGAC 66339 | |||||||| ||| || || || | |||||||| | | |||| ||| Sbjct 26573 GAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GAC 26630 Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCC 66398 | || || || || | || || || | || || ||| || | || || ||||||||| Sbjct 26631 CAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCC 26689 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || || || ||| |||||| || | || ||| | || || | | || Sbjct 26690 TCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTA 26749 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || ||||| || | || || ||||| || || || | || | || | || ||||| Sbjct 26750 CCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAG 26809 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 66576 || |||| || ||| || ||||| |||||||| || || |||||||| | | Sbjct 26810 GTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGA 26867 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 ||| || || | || | | |||| || | ||| | ||| || || | | Sbjct 26868 GGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGG 26927 Query 66637 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 66696 |||| |||||||| |||||||| |||||| || ||||| | |||| | |||||||| | Sbjct 26928 TTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCT 26987 Query 66697 TATCCTTATATTTGTTAACTACATC-CATGGTAATACTTGAAATAATCGGAGAATGTTTC 66755 |||| || ||| | || | || ||| | | |||| || || |||| | ||| Sbjct 26988 CATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTC 27046 Query 66756 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 66815 || || || |||||||||| | | | ||| || || | || | || || Sbjct 27047 TTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTT 27106 Query 66816 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875 || | ||||| || || || || ||||| | |||||| | || ||||| || |||||| Sbjct 27107 GTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || ||||| || || || || ||||||| || | | |||| || |||||| Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 |||||||| || | ||| ||||| | ||| | || |||||||| |||||||| Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 ||||||||||| || ||||| || | ||||||||| |||| | || | ||| || | | Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157 Query 65916 CA 65917 || Sbjct 26158 CA 26159 >seq60 Length=71262 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| ||| || || || || ||| |||||||| || | || | |||||||| Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || ||||| || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 || || || || || || || || || || || Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658138435152680