Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq372 107 2e-18 >seq372 Length=23634 Score = 107 bits (118), Expect = 2e-18 Identities = 205/297 (69%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 || || ||||| | |||| | || || || ||||| |||||| ||| || ||||| || Sbjct 12542 ACATAGAACTG-CGCAAACATATGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGG 12484 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC-----C 21224 ||||||||| ||| | |||||| || ||| || ||| || || | | Sbjct 12483 GTTCCACGCCGACAGGATGATGCGGCGGTCGAACGGG-----GTTTCTTTGAGCTTGCGC 12429 Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284 || || | ||||||||| || ||| | ||| ||| | || | || || |||| Sbjct 12428 ACGACCTCGGCCAGCTGGTCGACGCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTAC 12369 Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGG 21344 |||||||| ||||| | |||||||||||||||||| || ||||| ||||||||| ||| Sbjct 12368 TCCGCCCCGAAATGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGG 12309 Query 21345 TCCCCGAAGCCCTGCGC-CGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 | | | ||||| ||| ||| || ||||| ||||| ||||||| || || Sbjct 12308 TGCGC-CAGCCCAACGCGATCCAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTT 12253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427754223126960