Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq372 107 2e-18
>seq372
Length=23634
Score = 107 bits (118), Expect = 2e-18
Identities = 205/297 (69%), Gaps = 14/297 (5%)
Strand=Plus/Minus
Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169
|| || ||||| | |||| | || || || ||||| |||||| ||| || ||||| ||
Sbjct 12542 ACATAGAACTG-CGCAAACATATGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGG 12484
Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC-----C 21224
||||||||| ||| | |||||| || ||| || ||| || || | |
Sbjct 12483 GTTCCACGCCGACAGGATGATGCGGCGGTCGAACGGG-----GTTTCTTTGAGCTTGCGC 12429
Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284
|| || | ||||||||| || ||| | ||| ||| | || | || || ||||
Sbjct 12428 ACGACCTCGGCCAGCTGGTCGACGCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTAC 12369
Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGG 21344
|||||||| ||||| | |||||||||||||||||| || ||||| ||||||||| |||
Sbjct 12368 TCCGCCCCGAAATGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGG 12309
Query 21345 TCCCCGAAGCCCTGCGC-CGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400
| | | ||||| ||| ||| || ||||| ||||| ||||||| || ||
Sbjct 12308 TGCGC-CAGCCCAACGCGATCCAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTT 12253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427754223126960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |