Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq464 84.2 2e-11 >seq464 Length=17248 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAG 139633 || || || ||||| || ||| | |||| | ||||| |||||||||||||| || Sbjct 11815 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 11874 Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTG 139692 || ||||| ||||| || || || || || || ||||| ||| | ||||| || | | Sbjct 11875 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTGAATCTTTGTCTTGACATT 11933 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | |||||| | | ||| ||||| | || | ||||| || || | ||||| || Sbjct 11934 GTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGAC 11993 Query 139753 GAATATTTGCATA 139765 ||| || |||||| Sbjct 11994 GAAGATCTGCATA 12006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496038099258400