Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq127 210 3e-49
seq60 96.9 5e-15
>seq127
Length=50345
Score = 210 bits (232), Expect = 3e-49
Identities = 592/900 (66%), Gaps = 12/900 (1%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
||||||||||| || | ||||| | || ||||| ||| ||| || | | | |
Sbjct 26273 TCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCGCTAGGGCAGAAGAGGGTC 26332
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | ||| || || ||||| || ||||||||| |||| ||||| ||
Sbjct 26333 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAC 26392
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
| ||| | | ||| || || ||||| ||||| || || | |||| | |
Sbjct 26393 AAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAG 26452
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| ||| || ||||| || |||| || ||||| | | || || || |||||||| |||
Sbjct 26453 ACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCC 26512
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||||||||| |||||||| | || | || ||| |||| ||| |||||||||
Sbjct 26513 TGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGAT 26572
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 80218
| |||||||| ||| || || || |||||||||| | | ||| ||||
Sbjct 26573 GAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTG--AGAC 26630
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCC 80277
| || || || || | || || || | || || ||| || | || || |||||||||
Sbjct 26631 CAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCC 26689
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337
|| ||||| || || |||||| || | || ||| | || || | | ||
Sbjct 26690 TCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTA 26749
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397
|| ||||| || | || || ||||| || || || | || | |||| || |||||
Sbjct 26750 CCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAG 26809
Query 80398 GTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACA 80455
|| |||| || |||| || ||||| |||||||| || || |||||||| | |
Sbjct 26810 GTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGA 26867
Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAG 80515
||| || || | || | | |||| ||| | ||| | |||||| || | |
Sbjct 26868 GGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGG 26927
Query 80516 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 80575
|||| |||||||| |||||||| |||||| || ||||| | |||| | |||||||| |
Sbjct 26928 TTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCT 26987
Query 80576 TATCCTTATATTTGTTAACTACATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTC 80634
|||| || ||| | || | || ||| | | |||| || || |||| | |||
Sbjct 26988 CATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTC 27046
Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 80694
|| || || || ||||||| | | | ||| || || | || | || ||
Sbjct 27047 TTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTT 27106
Query 80695 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGT 80754
|| | |||||| || || || || ||||| | ||||| | || ||||| |||||||||
Sbjct 27107 GTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166
Score = 87.8 bits (96), Expect = 3e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| ||||| || || || || ||||||| || | | |||| || || ||||||||
Sbjct 25984 GAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCAGTGCAA 26043
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
||||| | || ||||| | ||| | || |||||||| |||||||| ||||||
Sbjct 26044 AGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAAGCATCC 26103
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 79796
||||| || ||||| || | ||||||||| |||| | || | ||| || | |||
Sbjct 26104 TTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATACCA 26159
>seq60
Length=71262
Score = 96.9 bits (106), Expect = 5e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| ||| || || || || ||| |||||||| || | || || ||||||||
Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| ||||| || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|| || ||||| || || || || || || || || ||
Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGCTACGAG 42271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718231297390280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |