Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq127 190 3e-43
seq60 95.1 2e-14
>seq127
Length=50345
Score = 190 bits (210), Expect = 3e-43
Identities = 541/822 (66%), Gaps = 12/822 (1%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
|| || ||||| || ||||||||| |||| ||||| || | ||| | | |||
Sbjct 26351 ACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACT 26410
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || ||||| ||||| || || | |||| | | | ||| || ||||| ||
Sbjct 26411 TCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGC 26470
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|||| || ||||| | | || || || |||||||| ||||| || | |||||||||
Sbjct 26471 TCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCA 26530
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
|||||||| | || | || ||| |||| ||| |||||||||| |||||||| |||
Sbjct 26531 GTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCA 26590
Query 72262 ATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTT 72319
|| || || |||||||||| || |||| |||| || || || || | |
Sbjct 26591 ATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GACCAATACCACCGGCAGTCT 26648
Query 72320 TAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCCTCTATACTATCATCCATC 72378
| || || | || || ||| || | || || ||||||||||| || || || ||| ||
Sbjct 26649 TGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTC 26707
Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438
|||| || | || ||| | || || | | || || ||||| || | ||
Sbjct 26708 ATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTG 26767
Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498
|| ||||| || || || | || | |||| || ||||| || |||| || ||||
Sbjct 26768 GGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGC--CTTCT 26825
Query 72499 ATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556
|| ||||| || ||||| || || |||||||| | | || || || | ||
Sbjct 26826 CAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGG 26885
Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616
| | |||| ||| | ||| | ||| || || | ||||| |||||||| ||||
Sbjct 26886 CAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTAGT 26945
Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAA 72676
|||| |||||| || ||||| | |||| | || ||||| | |||| || ||| | |
Sbjct 26946 TGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCTCATCCGCATGTTTCATGA 27005
Query 72677 CTATATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735
| || || ||| | | |||| || || |||| | ||| || || || || |||
Sbjct 27006 CGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTCTTGTTCTTGGGGTTGACA 27064
Query 72736 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 72795
|||| | | | ||| || || | || | || |||| | |||||| || ||
Sbjct 27065 TAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTTGTCTGCTTGTGGAGGTTG 27124
Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837
|| || ||||| | ||||| || || ||||| |||||||||
Sbjct 27125 GAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| || ||||| || || || || ||||||| || | | |||| ||||| |||
Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
|||||||| || | ||| ||||| | ||| | || |||||||| ||||||||
Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
||||||||||| || || || || | ||||||||| |||| | || | ||| || | |
Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157
Query 71878 CA 71879
||
Sbjct 26158 CA 26159
>seq60
Length=71262
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| ||| || || || || ||| ||||||||||| | || | ||||||||
Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207
|| || ||||| || || || || || || ||
Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671104158144520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |