Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq127 190 3e-43 seq60 95.1 2e-14 >seq127 Length=50345 Score = 190 bits (210), Expect = 3e-43 Identities = 541/822 (66%), Gaps = 12/822 (1%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| || ||||||||| |||| ||||| || | ||| | | ||| Sbjct 26351 ACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACT 26410 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || ||||| ||||| || || | |||| | | | ||| || ||||| || Sbjct 26411 TCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGC 26470 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 |||| || ||||| | | || || || |||||||| ||||| || | ||||||||| Sbjct 26471 TCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCA 26530 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 |||||||| | || | || ||| |||| ||| |||||||||| |||||||| ||| Sbjct 26531 GTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCA 26590 Query 72262 ATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTT 72319 || || || |||||||||| || |||| |||| || || || || | | Sbjct 26591 ATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GACCAATACCACCGGCAGTCT 26648 Query 72320 TAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCCTCTATACTATCATCCATC 72378 | || || | || || ||| || | || || ||||||||||| || || || ||| || Sbjct 26649 TGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTC 26707 Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438 |||| || | || ||| | || || | | || || ||||| || | || Sbjct 26708 ATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTG 26767 Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498 || ||||| || || || | || | |||| || ||||| || |||| || |||| Sbjct 26768 GGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGC--CTTCT 26825 Query 72499 ATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556 || ||||| || ||||| || || |||||||| | | || || || | || Sbjct 26826 CAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGG 26885 Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616 | | |||| ||| | ||| | ||| || || | ||||| |||||||| |||| Sbjct 26886 CAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTAGT 26945 Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAA 72676 |||| |||||| || ||||| | |||| | || ||||| | |||| || ||| | | Sbjct 26946 TGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCTCATCCGCATGTTTCATGA 27005 Query 72677 CTATATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735 | || || ||| | | |||| || || |||| | ||| || || || || ||| Sbjct 27006 CGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTCTTGTTCTTGGGGTTGACA 27064 Query 72736 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 72795 |||| | | | ||| || || | || | || |||| | |||||| || || Sbjct 27065 TAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTTGTCTGCTTGTGGAGGTTG 27124 Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 || || ||||| | ||||| || || ||||| ||||||||| Sbjct 27125 GAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| || ||||| || || || || ||||||| || | | |||| ||||| ||| Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 |||||||| || | ||| ||||| | ||| | || |||||||| |||||||| Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 ||||||||||| || || || || | ||||||||| |||| | || | ||| || | | Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157 Query 71878 CA 71879 || Sbjct 26158 CA 26159 >seq60 Length=71262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || || || || ||| ||||||||||| | || | |||||||| Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 || || ||||| || || || || || || || Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671104158144520