Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq60 109 8e-19
>seq60
Length=71262
Score = 109 bits (120), Expect = 8e-19
Identities = 327/495 (66%), Gaps = 21/495 (4%)
Strand=Plus/Plus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| ||||||||||||| | |||||||| | || | | ||| | | ||| | |
Sbjct 42211 AAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCTACCTTTGCCCAACGT 42270
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || ||||| || || ||||| ||||| || || || ||||| | |||||
Sbjct 42271 CTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTC 42330
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||| |||||||| || || ||||| || || || | |||||| | || || ||
Sbjct 42331 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGT 42390
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604
|| ||||| || ||| |||||||||| | ||||| || || || | | | |||
Sbjct 42391 GATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCACCTCAACAACCGCCCT 42450
Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664
|| ||| || | | ||| ||||| ||||| | | |||| || ||
Sbjct 42451 AG-CAAGA---AG-GTGGTTGAGGACATCATCATTGAGGCTGTTGCC------ATTGAGA 42499
Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATG 125723
| ||||| || || || | || || | || | | |||||||||| ||| || |||
Sbjct 42500 AGGAGTTCCTGACAGAGGCTCTGCC-TTGTGCTCTCCTCGGCATGAACTCCAATCTGATG 42558
Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATT 125783
||| |||| || || || || || || ||||||||| || | ||| |||||
Sbjct 42559 TGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCG---CTCTCGGCAACAAGAAG 42615
Query 125784 TA---CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840
|| ||| |||| || ||||| ||||||||| || || || | || ||||||
Sbjct 42616 TACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGACC 42675
Query 125841 AACTTTTTCGAGAAG 125855
||||| || ||||||
Sbjct 42676 AACTTCTTTGAGAAG 42690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741020507446520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |