Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq464 125 2e-23 >seq464 Length=17248 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || ||||| | || || || ||||| || ||| Sbjct 12265 GTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCA 12324 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || ||||| || || || || || ||||||||||| | || Sbjct 12325 GCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTG 12384 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||||||| || ||||| || || |||||||||||||| || || Sbjct 12385 ACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 12444 Query 104543 TTTACAA 104549 || |||| Sbjct 12445 TTGACAA 12451 Score = 120 bits (132), Expect = 7e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || | || | ||| || || |||| || ||| ||||| || || ||||| | Sbjct 11777 TTCCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGG 11836 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 | || || | || |||||||| ||||| ||||| || || || | ||| || || || | Sbjct 11837 AGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTG 11896 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509 | || || || || ||||||||||||| || ||||| || | || || || | || Sbjct 11897 GAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTC-AGAGCTCTCA 11955 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| ||||| || ||||| || || |||||||| Sbjct 11956 ACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| || || || ||||| || ||||| | ||| || || ||||| |||||| Sbjct 12037 GTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCAAGTTGCTTTCCA 12096 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | || || || || || || || |||||||| || ||||||| || Sbjct 12097 GCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGGATCTTTGTCTTG 12156 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || ||| || | || ||||| ||||| || ||||| ||||| || || Sbjct 12157 ACGTTGTCGATTGTGTCG-GAGCTCTCGACCTCCAGTGTGATGGTCTTTCCAGTGAGAGT 12215 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 12216 CTTGACGAAGATCTGCAT 12233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151336779676316