Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq464 125 2e-23
>seq464
Length=17248
Score = 125 bits (138), Expect = 2e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || ||||| || ||||| | || || || ||||| || |||
Sbjct 12265 GTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCA 12324
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||| || ||||| || || || || || ||||||||||| | ||
Sbjct 12325 GCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTG 12384
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||||||| || ||||| || || |||||||||||||| || ||
Sbjct 12385 ACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 12444
Query 104543 TTTACAA 104549
|| ||||
Sbjct 12445 TTGACAA 12451
Score = 120 bits (132), Expect = 7e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || | || | ||| || || |||| || ||| ||||| || || ||||| |
Sbjct 11777 TTCCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGG 11836
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
| || || | || |||||||| ||||| ||||| || || || | ||| || || || |
Sbjct 11837 AGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTG 11896
Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509
| || || || || ||||||||||||| || ||||| || | || || || | ||
Sbjct 11897 GAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTC-AGAGCTCTCA 11955
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| ||||| || ||||| || || ||||||||
Sbjct 11956 ACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| || || || ||||| || ||||| | ||| || || ||||| ||||||
Sbjct 12037 GTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCAAGTTGCTTTCCA 12096
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | || || || || || || || |||||||| || ||||||| ||
Sbjct 12097 GCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGGATCTTTGTCTTG 12156
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || ||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 12157 ACGTTGTCGATTGTGTCG-GAGCTCTCGACCTCCAGTGTGATGGTCTTTCCAGTGAGAGT 12215
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 12216 CTTGACGAAGATCTGCAT 12233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151336779676316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |