Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq52 206 4e-49 seq166 201 2e-47 >seq52 Length=73495 Score = 206 bits (228), Expect = 4e-49 Identities = 208/268 (78%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || ||||||||||| |||| Sbjct 8323 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCTGCTA 8381 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | |||||||| ||||| ||||| || ||||||||| |||||| || ||||||| |||| Sbjct 8382 TTCGTCGTCTTGCTCGCCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTATGAGGAGA 8441 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| ||||||| || | || |||| |||||| || ||| |||| Sbjct 8442 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCTGTCATCCGTGATGCCGTCACCTACACCG 8501 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| ||||||||||||||||| |||| ||||||| || | || || || | Sbjct 8502 AGCACGCTAAGCGTAAGACTGTCACCTCACTGGACGTCGTCTACGCCCTCAAGCGCCAGG 8561 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 8562 GCCGTACCCTGTACGGTTTCGGTGGTTA 8589 >seq166 Length=44401 Score = 201 bits (222), Expect = 2e-47 Identities = 195/248 (79%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| |||| ||| |||||| || ||||| || || ||||| ||||| |||| Sbjct 42118 CGCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACTAAGCCCGCTA 42060 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 42059 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 42000 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| ||||||| || || |||| |||||| || ||| || | Sbjct 41999 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTG 41940 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | |||||||| || ||||| ||||||||| | || | ||||| || |||| ||||||| Sbjct 41939 AACACGCTAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTGAAGCGTCAAG 41880 Query 16671 GCCGTAAG 16678 | ||| || Sbjct 41879 GACGTGAG 41872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071380939661