Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq52 206 4e-49
seq166 201 2e-47
>seq52
Length=73495
Score = 206 bits (228), Expect = 4e-49
Identities = 208/268 (78%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 8323 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCTGCTA 8381
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| |||||||| ||||| ||||| || ||||||||| |||||| || ||||||| ||||
Sbjct 8382 TTCGTCGTCTTGCTCGCCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTATGAGGAGA 8441
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| ||||||| || | || |||| |||||| || ||| ||||
Sbjct 8442 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCTGTCATCCGTGATGCCGTCACCTACACCG 8501
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| ||||||||||||||||| |||| ||||||| || | || || || |
Sbjct 8502 AGCACGCTAAGCGTAAGACTGTCACCTCACTGGACGTCGTCTACGCCCTCAAGCGCCAGG 8561
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | || ||||| || ||||
Sbjct 8562 GCCGTACCCTGTACGGTTTCGGTGGTTA 8589
>seq166
Length=44401
Score = 201 bits (222), Expect = 2e-47
Identities = 195/248 (79%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| |||| ||| |||||| || ||||| || || ||||| ||||| ||||
Sbjct 42118 CGCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACTAAGCCCGCTA 42060
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| |||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 42059 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 42000
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| ||||||| || || |||| |||||| || ||| || |
Sbjct 41999 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTG 41940
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| |||||||| || ||||| ||||||||| | || | ||||| || |||| |||||||
Sbjct 41939 AACACGCTAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTGAAGCGTCAAG 41880
Query 16671 GCCGTAAG 16678
| ||| ||
Sbjct 41879 GACGTGAG 41872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071380939661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |