Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq127 187 3e-42 seq60 95.1 2e-14 >seq127 Length=50345 Score = 187 bits (206), Expect = 3e-42 Identities = 587/900 (65%), Gaps = 12/900 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | |||| |||| ||||| || || || | | | | Sbjct 26273 TCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCGCTAGGGCAGAAGAGGGTC 26332 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| ||| || || ||||| || ||||||||| |||| ||||| || Sbjct 26333 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAC 26392 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 | ||| | | ||| ||| || ||||| ||||| || || | |||| | | Sbjct 26393 AAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAG 26452 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| || ||||| || |||| || ||||| | | || || || |||||||| ||| Sbjct 26453 ACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCC 26512 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||||||||| |||||||| | || | || ||| |||| ||| || || ||| Sbjct 26513 TGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGAT 26572 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 63495 |||||||||||| || || || |||||||||| | | ||| |||| Sbjct 26573 GAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTG--AGAC 26630 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATACCC 63554 | || || || || | || || || | || || ||| || | ||||| ||||| ||| Sbjct 26631 CAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCC 26689 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || ||||| || || |||||| || | || ||| | || || | | || Sbjct 26690 TCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTA 26749 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || | || || ||||| || || || | || | || | || ||||| Sbjct 26750 CCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAG 26809 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 63732 || |||| || ||| || ||||| |||||||| || || |||||||| | | Sbjct 26810 GTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGA 26867 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792 ||| || || | || | | |||| || | ||| | ||| || || | | Sbjct 26868 GGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGG 26927 Query 63793 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852 |||| |||||||| |||||||| |||||| || ||||| | |||| | |||||||| | Sbjct 26928 TTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCT 26987 Query 63853 TATCCTTATATTTGTTAACTATATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTC 63911 |||| || ||| | || || || ||| | | |||| || || |||| | ||| Sbjct 26988 CATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTC 27046 Query 63912 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63971 || || || || ||||||| | | | ||| || || | || | || || Sbjct 27047 TTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTT 27106 Query 63972 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 || | |||||| || || || || ||||| | ||||| || || ||||| || |||||| Sbjct 27107 GTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| || ||||| || || || || ||||||| || | | |||| || |||||| Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 |||||||| || | ||||||||| | ||| | || |||||||| |||||||| Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 ||||||||||| || ||||| || | ||||||||| |||| | || | ||| || | | Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157 Query 63072 CA 63073 || Sbjct 26158 CA 26159 >seq60 Length=71262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| ||| || || || || ||| |||||||| || | || || |||||||| Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || || || || || || ||| Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 || || ||||| || || || ||||| || || Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622914674369320