Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq127 187 3e-42
seq60 95.1 2e-14
>seq127
Length=50345
Score = 187 bits (206), Expect = 3e-42
Identities = 587/900 (65%), Gaps = 12/900 (1%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
||||||||||| || | |||| |||| ||||| || || || | | | |
Sbjct 26273 TCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCGCTAGGGCAGAAGAGGGTC 26332
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| || |||| ||| || || ||||| || ||||||||| |||| ||||| ||
Sbjct 26333 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAC 26392
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
| ||| | | ||| ||| || ||||| ||||| || || | |||| | |
Sbjct 26393 AAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAG 26452
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| ||| || ||||| || |||| || ||||| | | || || || |||||||| |||
Sbjct 26453 ACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCC 26512
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | ||||||||| |||||||| | || | || ||| |||| ||| || || |||
Sbjct 26513 TGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGAT 26572
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 63495
|||||||||||| || || || |||||||||| | | ||| ||||
Sbjct 26573 GAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTG--AGAC 26630
Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATACCC 63554
| || || || || | || || || | || || ||| || | ||||| ||||| |||
Sbjct 26631 CAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCC 26689
Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614
|| ||||| || || |||||| || | || ||| | || || | | ||
Sbjct 26690 TCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTA 26749
Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674
|| ||||| || | || || ||||| || || || | || | || | || |||||
Sbjct 26750 CCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAG 26809
Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 63732
|| |||| || ||| || ||||| |||||||| || || |||||||| | |
Sbjct 26810 GTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGA 26867
Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792
||| || || | || | | |||| || | ||| | ||| || || | |
Sbjct 26868 GGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGG 26927
Query 63793 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852
|||| |||||||| |||||||| |||||| || ||||| | |||| | |||||||| |
Sbjct 26928 TTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCT 26987
Query 63853 TATCCTTATATTTGTTAACTATATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTC 63911
|||| || ||| | || || || ||| | | |||| || || |||| | |||
Sbjct 26988 CATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTC 27046
Query 63912 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63971
|| || || || ||||||| | | | ||| || || | || | || ||
Sbjct 27047 TTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTT 27106
Query 63972 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031
|| | |||||| || || || || ||||| | ||||| || || ||||| || ||||||
Sbjct 27107 GTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 27166
Score = 104 bits (114), Expect = 3e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || ||||| || || || || ||||||| || | | |||| || ||||||
Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
|||||||| || | ||||||||| | ||| | || |||||||| ||||||||
Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
||||||||||| || ||||| || | ||||||||| |||| | || | ||| || | |
Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157
Query 63072 CA 63073
||
Sbjct 26158 CA 26159
>seq60
Length=71262
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| ||| || || || || ||| |||||||| || | || || ||||||||
Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| ||||| || ||||| ||||||||||| || ||||| || || || || || || |||
Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446
|| || ||||| || || || ||||| || ||
Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622914674369320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |