Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq464 86.0 5e-12 >seq464 Length=17248 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | ||| |||| || || ||||| ||||| || ||||||||||||| Sbjct 12234 CCCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 12293 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | | ||||||| ||| || || ||| | || | ||||| ||||| || Sbjct 12294 CAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGG 12353 Query 16828 CACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||| ||| | ||| || | | | | ||| |||| | |||| Sbjct 12354 GATACCCTCCTTGTCCTGAATCTTGGT-CTTGACGTTGTCGATAGTATCGCTAGACTCCA 12412 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAA 16925 || | |||||| || || || || || || ||||||| Sbjct 12413 CCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||||||||| ||||||||||||| | || | |||| Sbjct 12562 AGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 12621 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 |||| || ||||| || | || || ||||| ||||| || | |||||| |||| | Sbjct 12622 TCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 12681 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | |||||||| | |||| || | ||||||||| Sbjct 12682 TGGATCTTGGT-CTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGT 12740 Query 16903 TTTTCCGGT 16911 |||||||| Sbjct 12741 CTTTCCGGT 12749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405067378109230