Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq60 129 7e-25 >seq60 Length=71262 Score = 129 bits (142), Expect = 7e-25 Identities = 201/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||||||| | || || || |||||| |||| ||||| || ||| ||| Sbjct 42090 ATGTAGGTATCGATCAGGAGCGAGTAGGTTTCAGCGTGGATGTTCTCAATCATAATCTGG 42031 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 ||||||||||| || | |||||| | | |||||| || ||| | ||| | || Sbjct 42030 AATCCGTAGAAGCAACGAGCTTCAGGAACCTGCACCTCACCGCTAAAGCGCTCGAGCAGG 41971 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| ||||| ||||| || |||||||| || | | | | || || Sbjct 41970 TTCTCGTTGACAATACCGTCGGAAGCGGCAAAAAAGGCAAGGACACGGGAGATGAAGAAA 41911 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| || || || | | || | ||| ||| |||||||| |||||||||| |||| Sbjct 41910 CGCTCGTCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGATCTTTGGAAAGATCGATTTCT 41851 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| ||||||| || || || || ||||| |||||||| | ||| || Sbjct 41850 TCGGCAGTCCAGAAAGAGGCCTCGGCTTTCTTGTACATTTGCCAGAT 41804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556831724905480