Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq464 127 2e-24
seq98 82.4 6e-11
>seq464
Length=17248
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || |||||| |||| || || || |||| || || || || | | |
Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| ||| ||||| |||||||||||||||||||| || ||
Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 11886
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || |||||| |||| ||| ||||| ||||||| ||||||
Sbjct 11885 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 11826
Query 22399 ATTCAAAAAGAATCCACCATACA 22421
|| || || ||| ||| ||||
Sbjct 11825 ATCCAGAAGGAAAGCACTCTACA 11803
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || || | || ||||| || |||| || || ||||| | | |||||| | |
Sbjct 12451 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 12392
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
|| | |||| || ||||| |||||||||||||| || || || || || ||| | |
Sbjct 12391 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 12332
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| ||||| || || || | |||||| |||||| | ||||| |||||||| || || |
Sbjct 12331 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 12272
Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| | || | ||| |||| |||| || ||
Sbjct 12271 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 12235
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || ||| | || || || || |||| || || || || | | |
Sbjct 12234 GATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTC 12175
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| | |||| ||| || ||||| || ||||| || ||||| || ||
Sbjct 12174 CGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCA 12115
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||||||| || || || || || || | |||||| || || | || || |||||
Sbjct 12114 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 12055
Query 22398 CATTCAAAAAGAATCCACC 22416
||| ||||||||||| |||
Sbjct 12054 CATCCAAAAAGAATCTACC 12036
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| ||||| | | ||| || | ||| | ||||
Sbjct 12749 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGACACTATCGACAACGTCAAGACC 12690
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || || || || || || || || || || |||||
Sbjct 12689 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCAGGCAAG 12630
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || || ||| || ||||||| |||||||||||||| || || ||
Sbjct 12629 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGAC 12577
>seq98
Length=58949
Score = 82.4 bits (90), Expect = 6e-11
Identities = 90/119 (76%), Gaps = 3/119 (3%)
Strand=Plus/Minus
Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356
||| ||||||| ||||||||||||||| || || || || || ||||| || || |||
Sbjct 33082 AAAAAAAAAAT---AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCC 33026
Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| || ||| | |||||| |||||| | || || |||||||| || || || || ||
Sbjct 33025 GGTAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGAC 32967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419706632828005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |