Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq464 127 2e-24 seq98 82.4 6e-11 >seq464 Length=17248 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||| |||| || || || |||| || || || || | | | Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||| ||||| |||||||||||||||||||| || || Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 11886 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || |||||| |||| ||| ||||| ||||||| |||||| Sbjct 11885 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 11826 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || || ||| ||| |||| Sbjct 11825 ATCCAGAAGGAAAGCACTCTACA 11803 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || || | || ||||| || |||| || || ||||| | | |||||| | | Sbjct 12451 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 12392 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 || | |||| || ||||| |||||||||||||| || || || || || ||| | | Sbjct 12391 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 12332 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | ||||| || || || | |||||| |||||| | ||||| |||||||| || || | Sbjct 12331 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 12272 Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| | || | ||| |||| |||| || || Sbjct 12271 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 12235 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || ||| | || || || || |||| || || || || | | | Sbjct 12234 GATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTC 12175 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | ||| | |||| ||| || ||||| || ||||| || ||||| || || Sbjct 12174 CGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCA 12115 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||||||| || || || || || || | |||||| || || | || || ||||| Sbjct 12114 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 12055 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| ||||||||||| ||| Sbjct 12054 CATCCAAAAAGAATCTACC 12036 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| ||||| | | ||| || | ||| | |||| Sbjct 12749 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGACACTATCGACAACGTCAAGACC 12690 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || || || || || || ||||| Sbjct 12689 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCAGGCAAG 12630 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || || ||| || ||||||| |||||||||||||| || || || Sbjct 12629 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGAC 12577 >seq98 Length=58949 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356 ||| ||||||| ||||||||||||||| || || || || || ||||| || || ||| Sbjct 33082 AAAAAAAAAAT---AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCC 33026 Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || || ||| | |||||| |||||| | || || |||||||| || || || || || Sbjct 33025 GGTAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGAC 32967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419706632828005