Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq60 145 2e-29
seq86 93.3 9e-14
>seq60
Length=71262
Score = 145 bits (160), Expect = 2e-29
Identities = 279/407 (69%), Gaps = 16/407 (4%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | |||||| | || ||||| ||||||||| ||||||||||| |||
Sbjct 42686 TCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATGAAATCGAAGGGGTTGGTG 42627
Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
|||||| |||| |||| | ||| || || || | | ||||| || || || ||
Sbjct 42626 GCATTGAAGTACTTCTTG---TTGCCGAGAGCGACCAGTAGACGGTCGGCAACGAATTCA 42570
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739
| |||||| | |||||| | ||||||||||| | | | |||||| | |||||
Sbjct 42569 ATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGAGCACAAGGCAGAGCCTCTGTC 42510
Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCA 251794
| ||| ||||| || ||||||| ||||| | || ||| ||||| ||| |
Sbjct 42509 AGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATGTCCTCAACCACCTTCTTGCTA 42450
Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854
| | | ||||| || | ||| |||| | | |||| | ||| |||||||
Sbjct 42449 GGG--CGGTTGTT---GAGGTGAGAGAACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCT 42395
Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914
| || || ||||| ||||||||| | || |||||||||| ||||| ||| | |
Sbjct 42394 CATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTCTTCA 42335
Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||||| | | |||||| |||||||| | | |||||| |||
Sbjct 42334 GCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCCTCAACA 42288
>seq86
Length=62340
Score = 93.3 bits (102), Expect = 9e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| |||||||| || || |||||| ||||| | || | | ||
Sbjct 51417 CTCACTCCCGCATGCGCGGTCTGTCCGGTGGCCAGCGTGTCAAGGTCGTGCTTGCTGCTT 51476
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
||||| ||||| | |||||||| ||||| || ||||||||||||||||| || |||||
Sbjct 51477 GCTCT-TGGCAGCGTCCTCACGTCATCGTCCTGGACGAGCCTACCAACTACCTCGACCGT 51535
Query 280821 GAGAGCCTGGGCGCTCTG 280838
|| ||| || ||||||
Sbjct 51536 GACTCCCTTGGTGCTCTG 51553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027781792422857
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |