Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq60 145 2e-29 seq86 93.3 9e-14 >seq60 Length=71262 Score = 145 bits (160), Expect = 2e-29 Identities = 279/407 (69%), Gaps = 16/407 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| | || ||||| ||||||||| ||||||||||| ||| Sbjct 42686 TCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATGAAATCGAAGGGGTTGGTG 42627 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 |||||| |||| |||| | ||| || || || | | ||||| || || || || Sbjct 42626 GCATTGAAGTACTTCTTG---TTGCCGAGAGCGACCAGTAGACGGTCGGCAACGAATTCA 42570 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | |||||| | |||||| | ||||||||||| | | | |||||| | ||||| Sbjct 42569 ATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGAGCACAAGGCAGAGCCTCTGTC 42510 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCA 251794 | ||| ||||| || ||||||| ||||| | || ||| ||||| ||| | Sbjct 42509 AGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATGTCCTCAACCACCTTCTTGCTA 42450 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854 | | | ||||| || | ||| |||| | | |||| | ||| ||||||| Sbjct 42449 GGG--CGGTTGTT---GAGGTGAGAGAACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCT 42395 Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914 | || || ||||| ||||||||| | || |||||||||| ||||| ||| | | Sbjct 42394 CATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTCTTCA 42335 Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||||| | | |||||| |||||||| | | |||||| ||| Sbjct 42334 GCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCCTCAACA 42288 >seq86 Length=62340 Score = 93.3 bits (102), Expect = 9e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| |||||||| || || |||||| ||||| | || | | || Sbjct 51417 CTCACTCCCGCATGCGCGGTCTGTCCGGTGGCCAGCGTGTCAAGGTCGTGCTTGCTGCTT 51476 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 ||||| ||||| | |||||||| ||||| || ||||||||||||||||| || ||||| Sbjct 51477 GCTCT-TGGCAGCGTCCTCACGTCATCGTCCTGGACGAGCCTACCAACTACCTCGACCGT 51535 Query 280821 GAGAGCCTGGGCGCTCTG 280838 || ||| || |||||| Sbjct 51536 GACTCCCTTGGTGCTCTG 51553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027781792422857