Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq464 179 7e-40 seq81 132 9e-26 seq60 100 5e-16 seq4161 93.3 8e-14 seq86 84.2 4e-11 >seq464 Length=17248 Score = 179 bits (198), Expect = 7e-40 Identities = 180/234 (77%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| ||||| || || ||||| | |||| |||||| ||| || || |||||||| || Sbjct 11772 TTAGTTTCCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTA 11831 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 |||||||| || | ||||||||||| ||| || || ||||| ||||| | || ||||| Sbjct 11832 GTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTC 11891 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 |||||||| || |||||||| |||||||||| |||||| ||||| ||||| | Sbjct 11892 TGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCT 11951 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| |||||||| ||||| || || || |||||||| |||||||| Sbjct 11952 CTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || |||||||||||||| || || || Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || ||||| ||||| | ||| ||||| ||||| Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || || ||||| ||||||| ||||||| ||||| ||||| | || || Sbjct 12127 ATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACC 12186 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| ||||| ||||| ||||||||||| |||||||| Sbjct 12187 TCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 125 bits (138), Expect = 1e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || ||||| || || |||||||| || ||||| Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || || || || | | || ||||| || || Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| |||||||| | ||||||| ||||| || || ||| || || || Sbjct 12355 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATC-GCTAGACTCCAC 12413 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || | |||||| || || || |||||||||||||| Sbjct 12414 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 12449 >seq81 Length=63167 Score = 132 bits (146), Expect = 9e-26 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 62899 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62841 >seq60 Length=71262 Score = 100 bits (110), Expect = 5e-16 Identities = 287/440 (65%), Gaps = 10/440 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| || || ||||||||||| || || || ||| |||||||||| |||||| | Sbjct 42723 CATAACACCGGCCTTCTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGC 42664 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| || ||||||||| || |||||||| ||| || | ||| || || Sbjct 42663 AAGGGAGATAGACTCCATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCC 42604 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||| || ||||| || || ||||||| |||||| | ||||| Sbjct 42603 GAGAGCGACCAGTAGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTT 42544 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | || || | || || | ||| ||||| || |||| || || Sbjct 42543 CATGCCGAGGAGAGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGC 42484 Query 10175 TTCCTCGACGATGCTCTTTACCACGT-----CAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229 || || |||| || ||||| | | |||| | ||||| ||| | || Sbjct 42483 CTCAATGATGATGTCCTCAACCACCTTCTTGCTAGGG--CGGTTGTT---GAGGTGAGAG 42429 Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 |||| | |||| | ||| || ||||| || ||| ||||| ||||||||| Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 || ||||| ||||| || || || || ||||||||| || | | || || || Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309 Query 10350 GAGAACAGAAGACCCTCCAC 10369 ||||| | | |||||| || Sbjct 42308 GAGAAAAAGATACCCTCAAC 42289 >seq4161 Length=204 Score = 93.3 bits (102), Expect = 8e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGA 68407 || ||||||||||| ||||| || || ||||| ||| ||| |||||||| || ||| Sbjct 124 GGGGGAATGCCTTCTTTGTCCTGGAT-TTTGCTCTTAACGTTGTCGATGGTATCGCTTGA 66 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | |||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 65 CTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11 >seq86 Length=62340 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 ||||| | |||||| || ||||| || ||| || || | |||||| || || Sbjct 50235 GCGTCCAAGTCGTGCTCGACGTAGACGGTCTTGACCTCGCTCTTCTTGGGGAAACCTTCA 50176 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || || ||||| | ||||| |||| || | |||||||| |||| Sbjct 50175 AGCTGCTCGTTGTTGATAGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGGCCGAGC 50116 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAG-GCGCGTGGAGTTCAGGAGGATCTTGCC 225948 || |||||| | | || ||||| | ||| ||| || ||| || | ||||||| | Sbjct 50115 AGACCGTAACGCTGACCACGCTTCAGACGGAGAGCG-GTCTGGTTGAGCAAGATCTTGGC 50057 Query 225949 ACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||| || |||||||| ||| | ||| || || ||||||||||| Sbjct 50056 ACCATAAGCCAGGGAGAAAGTGCAGTTGCAGAGATCTTCACCCTCCTC 50009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921574279790440