Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq464 179 7e-40
seq81 132 9e-26
seq60 100 5e-16
seq4161 93.3 8e-14
seq86 84.2 4e-11
>seq464
Length=17248
Score = 179 bits (198), Expect = 7e-40
Identities = 180/234 (77%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| ||||| || || ||||| | |||| |||||| ||| || || |||||||| ||
Sbjct 11772 TTAGTTTCCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTA 11831
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
|||||||| || | ||||||||||| ||| || || ||||| ||||| | || |||||
Sbjct 11832 GTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTC 11891
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|||||||| || |||||||| |||||||||| |||||| ||||| ||||| |
Sbjct 11892 TGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCT 11951
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||| |||||||| ||||| || || || |||||||| ||||||||
Sbjct 11952 CTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || || |||||||||||||| || || ||
Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || ||||| ||||| | ||| ||||| |||||
Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| || || ||||| ||||||| ||||||| ||||| ||||| | || ||
Sbjct 12127 ATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACC 12186
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct 12187 TCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 125 bits (138), Expect = 1e-23
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||| ||| || ||||| || || |||||||| || |||||
Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || || || || | | || ||||| || ||
Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| |||||||| | ||||||| ||||| || || ||| || || ||
Sbjct 12355 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATC-GCTAGACTCCAC 12413
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449
|| | |||||| || || || ||||||||||||||
Sbjct 12414 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 12449
>seq81
Length=63167
Score = 132 bits (146), Expect = 9e-26
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| || ||||| | ||||||| |||
Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 62899 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62841
>seq60
Length=71262
Score = 100 bits (110), Expect = 5e-16
Identities = 287/440 (65%), Gaps = 10/440 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||| || || ||||||||||| || || || ||| |||||||||| |||||| |
Sbjct 42723 CATAACACCGGCCTTCTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGC 42664
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| || ||||||||| || |||||||| ||| || | ||| || ||
Sbjct 42663 AAGGGAGATAGACTCCATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCC 42604
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||| || ||||| || || ||||||| |||||| | |||||
Sbjct 42603 GAGAGCGACCAGTAGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTT 42544
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | | || || | || || | ||| ||||| || |||| || ||
Sbjct 42543 CATGCCGAGGAGAGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGC 42484
Query 10175 TTCCTCGACGATGCTCTTTACCACGT-----CAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229
|| || |||| || ||||| | | |||| | ||||| ||| | ||
Sbjct 42483 CTCAATGATGATGTCCTCAACCACCTTCTTGCTAGGG--CGGTTGTT---GAGGTGAGAG 42429
Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
|||| | |||| | ||| || ||||| || ||| ||||| |||||||||
Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| ||||| ||||| || || || || ||||||||| || | | || || ||
Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309
Query 10350 GAGAACAGAAGACCCTCCAC 10369
||||| | | |||||| ||
Sbjct 42308 GAGAAAAAGATACCCTCAAC 42289
>seq4161
Length=204
Score = 93.3 bits (102), Expect = 8e-14
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGA 68407
|| ||||||||||| ||||| || || ||||| ||| ||| |||||||| || |||
Sbjct 124 GGGGGAATGCCTTCTTTGTCCTGGAT-TTTGCTCTTAACGTTGTCGATGGTATCGCTTGA 66
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | |||||| || ||||| ||||||||||| ||||| |||||||||
Sbjct 65 CTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11
>seq86
Length=62340
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829
||||| | |||||| || ||||| || ||| || || | |||||| || ||
Sbjct 50235 GCGTCCAAGTCGTGCTCGACGTAGACGGTCTTGACCTCGCTCTTCTTGGGGAAACCTTCA 50176
Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889
||||| | || || ||||| | ||||| |||| || | |||||||| ||||
Sbjct 50175 AGCTGCTCGTTGTTGATAGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGGCCGAGC 50116
Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAG-GCGCGTGGAGTTCAGGAGGATCTTGCC 225948
|| |||||| | | || ||||| | ||| ||| || ||| || | ||||||| |
Sbjct 50115 AGACCGTAACGCTGACCACGCTTCAGACGGAGAGCG-GTCTGGTTGAGCAAGATCTTGGC 50057
Query 225949 ACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|||||| || |||||||| ||| | ||| || || |||||||||||
Sbjct 50056 ACCATAAGCCAGGGAGAAAGTGCAGTTGCAGAGATCTTCACCCTCCTC 50009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921574279790440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |