Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq464 123 6e-23
seq81 113 1e-19
seq4161 91.5 3e-13
seq143 89.7 1e-12
>seq464
Length=17248
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| || |||||||||||| || ||||| |
Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||| ||||| |||||||| ||||| || || ||||
Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || |||||||| ||||| || | || ||||| || || | || |||| ||
Sbjct 12127 ATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTC---TCG 12183
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || || |||||||||||||| ||||||||
Sbjct 12184 ACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 113 bits (124), Expect = 1e-19
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||||| ||| || || |||||||| | || || |||||||||
Sbjct 12583 TCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAG 12642
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| || | ||||| || || || |||||||| || | || |||||
Sbjct 12643 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 12702
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449
|| |||| ||||| || || || || || ||||| ||||| |||||
Sbjct 12703 TCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 12749
>seq81
Length=63167
Score = 113 bits (124), Expect = 1e-19
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || ||||| |||||||||
Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||| || |||||| || || || || |||||||| || | || |||||
Sbjct 62959 AGGCGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 62903
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||||||| || || ||||| || || ||||| || ||||| |||||||||
Sbjct 62902 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843
Query 288463 AA 288464
||
Sbjct 62842 AA 62841
>seq4161
Length=204
Score = 91.5 bits (100), Expect = 3e-13
Identities = 89/112 (79%), Gaps = 2/112 (2%)
Strand=Plus/Minus
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || |||||||| ||||||||||| ||| || ||||| || || | |||||| || ||
Sbjct 121 GGAATGCCTTCTTTGTCCTGGATTTT-GCTCTTAACGTTGTCGATGGTATCGCTTGACTC 63
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| ||||| || || || ||||| ||||| |||||||||
Sbjct 62 AACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11
>seq143
Length=47156
Score = 89.7 bits (98), Expect = 1e-12
Identities = 183/267 (69%), Gaps = 10/267 (4%)
Strand=Plus/Plus
Query 325391 CAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGA 325450
|| ||||| || ||| ||||||| | || || ||||| || ||||| |||| |
Sbjct 38784 CAATTGATATTGTTGGATCCGACAAAGTCTTGGGCAAGACCGACAATGGTTTGCTGCAAA 38843
Query 325451 GATGCTTCGCCATGGTGATAGGCGCT-ATGCTCTGCAACGTAACCGCTGAACTGTGCAAC 325509
|| || |||||||||||||||||| | || | | | ||||| |||| || | | ||
Sbjct 38844 GAGGCATCGCCATGGTGATAGGCGGTCATAC-CCGAAACGTGACCGGCGAGTTCAACGAC 38902
Query 325510 CTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGG 325569
||||| || || | | ||| || ||| | |||| ||||| |||||| ||
Sbjct 38903 CTTCATATCCTTCTTGAGATTCCGGCGAAAACAGGTGTATAAAACTTTGCGTTGACCCGG 38962
Query 325570 TTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA----GAACA 325625
||| || ||||| || || || |||||| ||| | || || |||| | |||||
Sbjct 38963 TTTCAACCCATCGACAACGGATGGAATGGATCG---AATATTGT-CCGCCATACTGAACA 39018
Query 325626 AAATAAGTTCCTTGTCGATGAAGTCGG 325652
|| || ||||||| |||||||||||
Sbjct 39019 GGATGAGCTCCTTGTTGATGAAGTCGG 39045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179591267477006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |