Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq464 123 6e-23 seq81 113 1e-19 seq4161 91.5 3e-13 seq143 89.7 1e-12 >seq464 Length=17248 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || |||||||||||| || ||||| | Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| ||||| |||||||| ||||| || || |||| Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || |||||||| ||||| || | || ||||| || || | || |||| || Sbjct 12127 ATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTC---TCG 12183 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || |||||||||||||| |||||||| Sbjct 12184 ACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 113 bits (124), Expect = 1e-19 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| ||| || || |||||||| | || || ||||||||| Sbjct 12583 TCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAG 12642 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| || || || |||||||| || | || ||||| Sbjct 12643 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 12702 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || |||| ||||| || || || || || ||||| ||||| ||||| Sbjct 12703 TCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 12749 >seq81 Length=63167 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || |||||| || || || || |||||||| || | || ||||| Sbjct 62959 AGGCGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 62903 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||| || || ||||| || ||||| ||||||||| Sbjct 62902 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843 Query 288463 AA 288464 || Sbjct 62842 AA 62841 >seq4161 Length=204 Score = 91.5 bits (100), Expect = 3e-13 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || |||||||| ||||||||||| ||| || ||||| || || | |||||| || || Sbjct 121 GGAATGCCTTCTTTGTCCTGGATTTT-GCTCTTAACGTTGTCGATGGTATCGCTTGACTC 63 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| ||||| || || || ||||| ||||| ||||||||| Sbjct 62 AACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11 >seq143 Length=47156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 325391 CAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGA 325450 || ||||| || ||| ||||||| | || || ||||| || ||||| |||| | Sbjct 38784 CAATTGATATTGTTGGATCCGACAAAGTCTTGGGCAAGACCGACAATGGTTTGCTGCAAA 38843 Query 325451 GATGCTTCGCCATGGTGATAGGCGCT-ATGCTCTGCAACGTAACCGCTGAACTGTGCAAC 325509 || || |||||||||||||||||| | || | | | ||||| |||| || | | || Sbjct 38844 GAGGCATCGCCATGGTGATAGGCGGTCATAC-CCGAAACGTGACCGGCGAGTTCAACGAC 38902 Query 325510 CTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGG 325569 ||||| || || | | ||| || ||| | |||| ||||| |||||| || Sbjct 38903 CTTCATATCCTTCTTGAGATTCCGGCGAAAACAGGTGTATAAAACTTTGCGTTGACCCGG 38962 Query 325570 TTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA----GAACA 325625 ||| || ||||| || || || |||||| ||| | || || |||| | ||||| Sbjct 38963 TTTCAACCCATCGACAACGGATGGAATGGATCG---AATATTGT-CCGCCATACTGAACA 39018 Query 325626 AAATAAGTTCCTTGTCGATGAAGTCGG 325652 || || ||||||| ||||||||||| Sbjct 39019 GGATGAGCTCCTTGTTGATGAAGTCGG 39045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179591267477006