Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq143 89.7 1e-12
seq60 84.2 5e-11
>seq143
Length=47156
Score = 89.7 bits (98), Expect = 1e-12
Identities = 183/267 (69%), Gaps = 10/267 (4%)
Strand=Plus/Plus
Query 297512 CAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGA 297571
|| ||||| || ||| ||||||| | || || ||||| || ||||| |||| |
Sbjct 38784 CAATTGATATTGTTGGATCCGACAAAGTCTTGGGCAAGACCGACAATGGTTTGCTGCAAA 38843
Query 297572 GATGCTTCGCCATGGTGATAGGCGCT-ATGCTCTGCAACGTAACCGCTGAACTGTGCAAC 297630
|| || |||||||||||||||||| | || | | | ||||| |||| || | | ||
Sbjct 38844 GAGGCATCGCCATGGTGATAGGCGGTCATAC-CCGAAACGTGACCGGCGAGTTCAACGAC 38902
Query 297631 CTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGG 297690
||||| || || | | ||| || ||| | |||| ||||| |||||| ||
Sbjct 38903 CTTCATATCCTTCTTGAGATTCCGGCGAAAACAGGTGTATAAAACTTTGCGTTGACCCGG 38962
Query 297691 TTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA----GAACA 297746
||| || ||||| || || || |||||| ||| | || || |||| | |||||
Sbjct 38963 TTTCAACCCATCGACAACGGATGGAATGGATCG---AATATTGT-CCGCCATACTGAACA 39018
Query 297747 AAATAAGTTCCTTGTCGATGAAGTCGG 297773
|| || ||||||| |||||||||||
Sbjct 39019 GGATGAGCTCCTTGTTGATGAAGTCGG 39045
>seq60
Length=71262
Score = 84.2 bits (92), Expect = 5e-11
Identities = 172/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
||||||| || || |||| | || ||||| ||| | || ||| | || ||
Sbjct 42472 ATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCT 42531
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||||| | || ||| | ||||| || |||||||| |||||||| |
Sbjct 42532 CTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTA 42591
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| || || | |||| | ||| ||| |||||||| | || ||||||
Sbjct 42592 CTGGTCGCTCTCGGCAACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAG 42651
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740
|| || ||| || || || |||||||| || |||||||| ||||||| || | |
Sbjct 42652 TCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAGAAG 42711
Query 243741 CCCTGGTGTGATG 243753
|| ||||| |||
Sbjct 42712 GCC-GGTGTTATG 42723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102820976274950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |