Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq143 89.7 1e-12 seq60 84.2 5e-11 >seq143 Length=47156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 297512 CAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGA 297571 || ||||| || ||| ||||||| | || || ||||| || ||||| |||| | Sbjct 38784 CAATTGATATTGTTGGATCCGACAAAGTCTTGGGCAAGACCGACAATGGTTTGCTGCAAA 38843 Query 297572 GATGCTTCGCCATGGTGATAGGCGCT-ATGCTCTGCAACGTAACCGCTGAACTGTGCAAC 297630 || || |||||||||||||||||| | || | | | ||||| |||| || | | || Sbjct 38844 GAGGCATCGCCATGGTGATAGGCGGTCATAC-CCGAAACGTGACCGGCGAGTTCAACGAC 38902 Query 297631 CTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGG 297690 ||||| || || | | ||| || ||| | |||| ||||| |||||| || Sbjct 38903 CTTCATATCCTTCTTGAGATTCCGGCGAAAACAGGTGTATAAAACTTTGCGTTGACCCGG 38962 Query 297691 TTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA----GAACA 297746 ||| || ||||| || || || |||||| ||| | || || |||| | ||||| Sbjct 38963 TTTCAACCCATCGACAACGGATGGAATGGATCG---AATATTGT-CCGCCATACTGAACA 39018 Query 297747 AAATAAGTTCCTTGTCGATGAAGTCGG 297773 || || ||||||| ||||||||||| Sbjct 39019 GGATGAGCTCCTTGTTGATGAAGTCGG 39045 >seq60 Length=71262 Score = 84.2 bits (92), Expect = 5e-11 Identities = 172/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||| || || |||| | || ||||| ||| | || ||| | || || Sbjct 42472 ATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCT 42531 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | || ||| | ||||| || |||||||| |||||||| | Sbjct 42532 CTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTA 42591 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | |||| | ||| ||| |||||||| | || |||||| Sbjct 42592 CTGGTCGCTCTCGGCAACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAG 42651 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 || || ||| || || || |||||||| || |||||||| ||||||| || | | Sbjct 42652 TCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAGAAG 42711 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 42712 GCC-GGTGTTATG 42723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102820976274950