Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq60 122 1e-22 seq127 120 4e-22 seq143 93.3 5e-14 >seq60 Length=71262 Score = 122 bits (134), Expect = 1e-22 Identities = 303/458 (66%), Gaps = 18/458 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || |||||||| |||||||| ||||| || | | | |||| |||||| Sbjct 42705 GTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCAT 42646 Query 125818 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAG 125871 ||||| || ||||| | |||| | | |||||| | | | | | || Sbjct 42645 GAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT----- 42591 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||| || | ||| | ||||| |||| ||||| | |||||||| |||| ||| Sbjct 42590 -AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAG 42532 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 ||| || || || || | |||| |||||||||| | || || || | ||| Sbjct 42531 AGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGAT 42472 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGC 126048 | | | || | | | ||| | | ||| | || ||| || ||| Sbjct 42471 GTCCTCAACCACCTTCTTGCTAGGGCGGTTGTTGAGGTGAGA---GAACAGCAAGCAGGC 42415 Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108 ||| || ||| |||||||| |||||||||||||| || || |||||| || || || Sbjct 42414 AAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 42355 Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168 ||| || || |||||||||| |||||| |||| ||| || || ||||| ||||| || Sbjct 42354 CATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACC 42295 Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||| ||| ||||| || | |||||| | ||||||| Sbjct 42294 CTCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257 >seq127 Length=50345 Score = 120 bits (132), Expect = 4e-22 Identities = 406/628 (65%), Gaps = 11/628 (2%) Strand=Plus/Plus Query 114697 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 114756 ||||||| ||| || || || ||||| || || | | || | | || || |||| Sbjct 26254 GTACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTC 26313 Query 114757 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGG 114816 ||||||||||| | ||| | ||| ||||||| ||||||||||| || || || Sbjct 26314 GCTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGG 26373 Query 114817 GATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 114876 |||||||||| |||| | ||| ||| | ||||||| | || || || ||| Sbjct 26374 AGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACG 26433 Query 114877 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 114936 | ||||| || || | || ||| | |||||| || ||||| || | || | || | | Sbjct 26434 GAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CAC 26492 Query 114937 CTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAG 114990 || |||| ||| |||||| || || || || ||| ||| || ||||| || Sbjct 26493 CT--GGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAG 26550 Query 114991 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 115050 ||| |||| || |||| ||| |||||| || || | ||| ||| |||| | Sbjct 26551 CATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACG 26610 Query 115051 GACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 | ||||| || | ||||||||| || || ||| || || || ||| | | Sbjct 26611 AATGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTT 26670 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA 115170 || || ||||||| || || || ||| |||| | | | | ||||||| | Sbjct 26671 CAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGC 26730 Query 115171 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC 115230 || || ||| || |||||||| ||||| || || || | || || |||| ||| Sbjct 26731 CAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAA-GTACT 26789 Query 115231 T-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 115289 | |||||||| | |||||| || | | | |||||| | |||||||| || | Sbjct 26790 TCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTCCAA 26849 Query 115290 TCGAGACCCGCATAAACATGTATTGGGG 115317 | || ||||| | | || |||||| Sbjct 26850 CGGCAACACGCATCAGGAGGTGTTGGGG 26877 >seq143 Length=47156 Score = 93.3 bits (102), Expect = 5e-14 Identities = 213/318 (67%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 172622 CCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGA 172681 |||||||| || |||||||| ||| || ||||| ||||| || | |||||||| Sbjct 39462 CCCTTAATATGACTACCATCGTGATCTTGGTCAGTCATGATCATCAGGTGGCCATAGCGG 39521 Query 172682 AG-CTCGGAAACATCTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATC 172740 || | | | | ||| ||||| || || || | |||| | || |||| | Sbjct 39522 AGGCCCCGGGTC-TCTGTGTACTCTTTCTTGTGCTGCAACCCCATAAAATTTTTGATGTT 39580 Query 172741 ATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTT 172800 | || || ||||| | | |||| | | |||||||| || || || ||| Sbjct 39581 TTGGATTTCCTGGTTCTTGGAAATTTGCTCAAACGAAGCATCCCGCACGTTAAGCATCTT 39640 Query 172801 CCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGC 172860 |||||||| || |||||||| || ||||| |||||||||| | | | ||||| | || Sbjct 39641 TCCACGGAGCGGATACACACCGAAGAGATCAGGACCAACCACTGCACGCCCAGCCATAGC 39700 Query 172861 GAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGT 172920 || ||| || || |||||||| |||| |||||| ||||| | | || ||| Sbjct 39701 AAGACCCTTGGCCGAGTCACCCTCAGTCAGGATGAGGGTACAGTGATGACCTTCCTTCGT 39760 Query 172921 CCCCGCCTTGTTCGCATC 172938 ||||||||||| ||||| Sbjct 39761 ACCCGCCTTGTTTGCATC 39778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597322410675160