Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq464 113 5e-20 seq81 96.9 4e-15 >seq464 Length=17248 Score = 113 bits (124), Expect = 5e-20 Identities = 148/201 (74%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||| ||||| || || ||||| || | || || ||| | || |||||||| |||||| Sbjct 11809 GTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCA 11868 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 42130 ||||| ||||| ||||||||||| | ||| | | |||||||||| ||| | ||||| || Sbjct 11869 GCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGTCTT 11927 Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 || | | | ||||| |||| || || || | |||||||| || || ||||| Sbjct 11928 GACATTGTCGATTGTGTCAGAGCTC---TCAACCTCCAGTGTGATGGTCTTTCCAGTTAG 11984 Query 42188 CGTCTTTACAAAGATTTGCAT 42208 || || || ||||| ||||| Sbjct 11985 AGTTTTGACGAAGATCTGCAT 12005 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 12582 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAA 12641 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 12642 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGT 12700 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | |||||||| || ||||| || | |||||||| || || || Sbjct 12701 TGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 12749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | |||||| || | || || || ||||||||||| || Sbjct 12271 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAG 12330 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || | ||||||||||| | || | | |||||||||| ||| | || || |||| ||| Sbjct 12331 ATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CGT 12388 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || ||||| || ||||| |||| ||||| || || || || || ||||| | Sbjct 12389 TGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGA 12448 Query 42196 CAA 42198 ||| Sbjct 12449 CAA 12451 >seq81 Length=63167 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 62903 Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 62902 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843 Query 42198 AA 42199 || Sbjct 62842 AA 62841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543184437501680