Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq464 98.7 1e-15 >seq464 Length=17248 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || || |||||||| || | || |||||| | ||||| ||||| || || || | Sbjct 11814 TTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAA 11873 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 ||||| ||||||||||| || ||||| || || || || || || ||| ||| ||| Sbjct 11874 GATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATT 11933 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | ||| ||| | || || || | || | |||||| || || | |||||| || Sbjct 11934 GTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGAC 11993 Query 64432 GAAAATTTGCAT 64443 ||| || ||||| Sbjct 11994 GAAGATCTGCAT 12005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| || ||||||||||| |||||||| || | Sbjct 12006 ACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGA 12065 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || ||||| ||||| || || | ||||| || |||||||| || || Sbjct 12066 CAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGG 12125 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || ||||| ||||| || ||| ||| || || | ||| || | || || Sbjct 12126 GATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGAC 12185 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | ||| || ||||| || ||||| Sbjct 12186 CTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || |||||||||||||| || | || || || ||||||| ||||||||||| Sbjct 12577 GTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCT 12636 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | || || ||||||||||| || || || || || || || || || || Sbjct 12637 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 12689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499618712295880