Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq464 98.7 1e-15
>seq464
Length=17248
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311
||| || || |||||||| || | || |||||| | ||||| ||||| || || || |
Sbjct 11814 TTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAA 11873
Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371
||||| ||||||||||| || ||||| || || || || || || ||| ||| |||
Sbjct 11874 GATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATT 11933
Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431
|| | ||| ||| | || || || | || | |||||| || || | |||||| ||
Sbjct 11934 GTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGAC 11993
Query 64432 GAAAATTTGCAT 64443
||| || |||||
Sbjct 11994 GAAGATCTGCAT 12005
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| || |||| || ||||||||||| |||||||| || |
Sbjct 12006 ACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGA 12065
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || ||||| ||||| || || | ||||| || |||||||| || ||
Sbjct 12066 CAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGG 12125
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || ||||| ||||| || ||| ||| || || | ||| || | || ||
Sbjct 12126 GATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGAC 12185
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| || || | ||| || ||||| || |||||
Sbjct 12186 CTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || |||||||||||||| || | || || || ||||||| |||||||||||
Sbjct 12577 GTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCT 12636
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
|| | || || ||||||||||| || || || || || || || || || ||
Sbjct 12637 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 12689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499618712295880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |