Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq127 163 3e-35
>seq127
Length=50345
Score = 163 bits (180), Expect = 3e-35
Identities = 404/608 (66%), Gaps = 4/608 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||||| || ||| || ||||| | | |||||
Sbjct 26952 AACTACAACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGC 26893
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| ||||||| || || || || |||||||| || ||| | || ||||||||| |
Sbjct 26892 AAGGTTGCCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAAT 26833
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
||||| ||| | | | | || |||| | ||| | || |||| |
Sbjct 26832 GACATTGAGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATG-C 26774
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
|||| || |||||||| || || ||||| ||| ||| || | || || ||| || |
Sbjct 26773 TTCCCCCACTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGT 26714
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| ||| || || | ||||| || ||| ||||| | |
Sbjct 26713 TGAC-ATGAAGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGA 26655
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
| || || || || || || || ||| ||||| | | ||||||| ||||| |
Sbjct 26654 TTTCCAAGACTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTT 26595
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| |||||||||||||| | ||||| || | || || ||||| || || ||||| |
Sbjct 26594 ACATTGGCGGTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATA 26535
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || | ||||| ||||||||||| | | | ||| | || || | ||||
Sbjct 26534 ACACTGCTAGATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATC 26475
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| ||||| |||||| | || || | ||| | ||||| || ||||||||||| || |
Sbjct 26474 TGGAGCCTTGGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGG 26415
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | || || | || | ||||||||||||||| || || || || ||||| |
Sbjct 26414 AAGAAGTCAGAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGC 26355
Query 94313 GCGTCGAG 94320
| || |||
Sbjct 26354 GGGTTGAG 26347
Score = 102 bits (112), Expect = 8e-17
Identities = 215/318 (68%), Gaps = 2/318 (1%)
Strand=Plus/Minus
Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154
|| || || || || |||||||| ||| ||| || ||||||||| |||||||
Sbjct 25535 CTTCTGGTTGCTCCTATGCCCACCGCCAGCACCAGTCAAATCCTTGGCTTTAACGAGTGC 25476
Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214
||||| || | |||||| ||| | ||| | || || || || || || |||| ||
Sbjct 25475 TTCGAGCCTTACACCTCGAACATCTACTCTCGCCGTGTCCTTGCGGGCGAGTTCCAAGTT 25416
Query 95215 ATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAA 95273
||||| | || ||| || | || | || || | ||| ||||| | ||
Sbjct 25415 GTCAACCCCTGGTTGCTGAAGGATCTAGTCGAC-CTTGGCCTCTGGTCCGACAACATGAA 25357
Query 95274 GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACAT 95333
||||| | | || || || ||||| |||||||||||| | || || ||||||
Sbjct 25356 GAACCGTATCATTGCCGACAGTGGTTCCGTTCAGAACATCCCGAATATTCCCTCGGACAT 25297
Query 95334 CAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGC 95393
|||||| || |||||||||||||||||||| | |||||| ||| || || || ||
Sbjct 25296 CAAGGCTCTATACAAGACCGTGTGGGAGATTTCCCAGCGCCGGATCCTGGAGATGGCTGC 25237
Query 95394 CGCCCGCGGGCCCTTCAT 95411
| ||| || |||||||
Sbjct 25236 TGACCGTGGTGCCTTCAT 25219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494697369264920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |