Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq127 163 3e-35 >seq127 Length=50345 Score = 163 bits (180), Expect = 3e-35 Identities = 404/608 (66%), Gaps = 4/608 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||||| || ||| || ||||| | | ||||| Sbjct 26952 AACTACAACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGC 26893 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||||| || || || || |||||||| || ||| | || ||||||||| | Sbjct 26892 AAGGTTGCCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAAT 26833 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| ||| | | | | || |||| | ||| | || |||| | Sbjct 26832 GACATTGAGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATG-C 26774 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 |||| || |||||||| || || ||||| ||| ||| || | || || ||| || | Sbjct 26773 TTCCCCCACTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGT 26714 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | ||||| || ||| ||||| | | Sbjct 26713 TGAC-ATGAAGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGA 26655 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | || || || || || || || ||| ||||| | | ||||||| ||||| | Sbjct 26654 TTTCCAAGACTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTT 26595 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| |||||||||||||| | ||||| || | || || ||||| || || ||||| | Sbjct 26594 ACATTGGCGGTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATA 26535 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| ||||||||||| | | | ||| | || || | |||| Sbjct 26534 ACACTGCTAGATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATC 26475 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||| | || || | ||| | ||||| || ||||||||||| || | Sbjct 26474 TGGAGCCTTGGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGG 26415 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | || || | || | ||||||||||||||| || || || || ||||| | Sbjct 26414 AAGAAGTCAGAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGC 26355 Query 94313 GCGTCGAG 94320 | || ||| Sbjct 26354 GGGTTGAG 26347 Score = 102 bits (112), Expect = 8e-17 Identities = 215/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 || || || || || |||||||| ||| ||| || ||||||||| ||||||| Sbjct 25535 CTTCTGGTTGCTCCTATGCCCACCGCCAGCACCAGTCAAATCCTTGGCTTTAACGAGTGC 25476 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || | |||||| ||| | ||| | || || || || || || |||| || Sbjct 25475 TTCGAGCCTTACACCTCGAACATCTACTCTCGCCGTGTCCTTGCGGGCGAGTTCCAAGTT 25416 Query 95215 ATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAA 95273 ||||| | || ||| || | || | || || | ||| ||||| | || Sbjct 25415 GTCAACCCCTGGTTGCTGAAGGATCTAGTCGAC-CTTGGCCTCTGGTCCGACAACATGAA 25357 Query 95274 GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACAT 95333 ||||| | | || || || ||||| |||||||||||| | || || |||||| Sbjct 25356 GAACCGTATCATTGCCGACAGTGGTTCCGTTCAGAACATCCCGAATATTCCCTCGGACAT 25297 Query 95334 CAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGC 95393 |||||| || |||||||||||||||||||| | |||||| ||| || || || || Sbjct 25296 CAAGGCTCTATACAAGACCGTGTGGGAGATTTCCCAGCGCCGGATCCTGGAGATGGCTGC 25237 Query 95394 CGCCCGCGGGCCCTTCAT 95411 | ||| || ||||||| Sbjct 25236 TGACCGTGGTGCCTTCAT 25219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494697369264920