Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq464 111 2e-19 seq60 109 5e-19 seq81 93.3 4e-14 >seq464 Length=17248 Score = 111 bits (122), Expect = 2e-19 Identities = 158/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| ||| | || | | | || ||||| || |||||||||||| | Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| ||||| ||||| | | |||| | |||||| ||||| || || Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || || || | ||| || | || ||| | ||||||| Sbjct 12355 ATACCCTCCTTGTC-CTGAATCTTGGTCTTGACGTTG-TCGATAGTATCGCTAGACTCCA 12412 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 |||||| || | || |||||||| || || || |||| Sbjct 12413 CCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || |||||||||||| | || ||| || || || |||||||| | || Sbjct 11815 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 11874 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATT 138541 || |||||||| ||||| || || ||||| || ||||| ||| | ||||| || ||| Sbjct 11875 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTGAATCTTTGTCTTGACATT 11933 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||| ||||| | || | || || ||||| |||||||| | Sbjct 11934 G-TCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGA 11992 Query 138602 CAAAAATCTGCAT 138614 | || |||||||| Sbjct 11993 CGAAGATCTGCAT 12005 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | || || ||||| ||||||||||| | Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||| || || | |||| ||||| || ||||| || || Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || ||||| || || | ||||| || | ||| || | ||||||| ||| | Sbjct 12127 ATGCCCTCTTTATC-TTGGATCTTTGTCTTGACGTTG-TCGATTGTGTCGGAGCTCTCGA 12184 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| ||||| || || || |||||||| Sbjct 12185 CCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 >seq60 Length=71262 Score = 109 bits (120), Expect = 5e-19 Identities = 340/523 (65%), Gaps = 25/523 (5%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| || ||| |||||||| ||||| | | ||||||| || | | Sbjct 42196 GTTCCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCT 42255 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445 || | ||| | || | || || ||||| || ||||| | ||||| || ||| | Sbjct 42256 ACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCC 42315 Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505 |||||| | ||||| | | || | | ||| | ||||| || || || ||| |||| Sbjct 42316 TTTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAAC 42375 Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC--------CTCT-AC 52556 ||| | || || || || || || || ||||| |||||||| ||| |||| || Sbjct 42376 GAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCAC 42435 Query 52557 TACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAG 52616 ||| | ||| | | | || ||| | ||||| ||| | ||| Sbjct 42436 CTCAACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATT------------GAG 42483 Query 52617 GCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATG 52676 || || || || || |||||||| | || | || ||||| | || || |||||| Sbjct 42484 GCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATG 42543 Query 52677 AACGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 ||| | || || |||||| |||| || || || || || || ||||| |||| || Sbjct 42544 AACTC-CAATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCT 42602 Query 52736 CGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGC 52794 ||| || | | ||||||||||| || ||| || || || || ||| | || || | Sbjct 42603 CGG-CAACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCC 42661 Query 52795 TTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| |||||||||||||| || |||||||| || || || || Sbjct 42662 TTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTA 42704 >seq81 Length=63167 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || ||||| || | || || || | ||| Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 62903 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 62902 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 62844 Query 138603 AAAA 138606 ||| Sbjct 62843 GAAA 62840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496236488899440