Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq464 111 2e-19
seq60 109 5e-19
seq81 93.3 4e-14
>seq464
Length=17248
Score = 111 bits (122), Expect = 2e-19
Identities = 158/219 (72%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| ||| | || | | | || ||||| || |||||||||||| |
Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| ||||| ||||| | | |||| | |||||| ||||| || ||
Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| | || || || | ||| || | || ||| | |||||||
Sbjct 12355 ATACCCTCCTTGTC-CTGAATCTTGGTCTTGACGTTG-TCGATAGTATCGCTAGACTCCA 12412
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
|||||| || | || |||||||| || || || ||||
Sbjct 12413 CCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
||||| || |||||||||||| | || ||| || || || |||||||| | ||
Sbjct 11815 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 11874
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATT 138541
|| |||||||| ||||| || || ||||| || ||||| ||| | ||||| || |||
Sbjct 11875 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTGAATCTTTGTCTTGACATT 11933
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||| | ||| ||||| | || | || || ||||| |||||||| |
Sbjct 11934 G-TCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGA 11992
Query 138602 CAAAAATCTGCAT 138614
| || ||||||||
Sbjct 11993 CGAAGATCTGCAT 12005
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || | || | | | || || ||||| ||||||||||| |
Sbjct 12007 CCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 12066
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| ||||| ||||| || || | |||| ||||| || ||||| || ||
Sbjct 12067 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGG 12126
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || ||||| || || | ||||| || | ||| || | ||||||| ||| |
Sbjct 12127 ATGCCCTCTTTATC-TTGGATCTTTGTCTTGACGTTG-TCGATTGTGTCGGAGCTCTCGA 12184
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || ||||| ||||| || || || ||||||||
Sbjct 12185 CCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
>seq60
Length=71262
Score = 109 bits (120), Expect = 5e-19
Identities = 340/523 (65%), Gaps = 25/523 (5%)
Strand=Plus/Plus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385
|| || ||| || ||| |||||||| ||||| | | ||||||| || | |
Sbjct 42196 GTTCCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCT 42255
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
|| | ||| | || | || || ||||| || ||||| | ||||| || ||| |
Sbjct 42256 ACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCC 42315
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
|||||| | ||||| | | || | | ||| | ||||| || || || ||| ||||
Sbjct 42316 TTTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAAC 42375
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC--------CTCT-AC 52556
||| | || || || || || || || ||||| |||||||| ||| |||| ||
Sbjct 42376 GAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCAC 42435
Query 52557 TACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAG 52616
||| | ||| | | | || ||| | ||||| ||| | |||
Sbjct 42436 CTCAACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATT------------GAG 42483
Query 52617 GCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATG 52676
|| || || || || |||||||| | || | || ||||| | || || ||||||
Sbjct 42484 GCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATG 42543
Query 52677 AACGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735
||| | || || |||||| |||| || || || || || || ||||| |||| ||
Sbjct 42544 AACTC-CAATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCT 42602
Query 52736 CGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGC 52794
||| || | | ||||||||||| || ||| || || || || ||| | || || |
Sbjct 42603 CGG-CAACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCC 42661
Query 52795 TTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| |||||||||||||| || |||||||| || || || ||
Sbjct 42662 TTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTA 42704
>seq81
Length=63167
Score = 93.3 bits (102), Expect = 4e-14
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||| ||||| || || || || || ||||| || | || || || | |||
Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 62903
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 62902 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 62844
Query 138603 AAAA 138606
|||
Sbjct 62843 GAAA 62840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496236488899440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |