Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq60 152 6e-32 seq127 105 8e-18 >seq60 Length=71262 Score = 152 bits (168), Expect = 6e-32 Identities = 313/458 (68%), Gaps = 18/458 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || |||||||| |||||||| ||||| ||| | ||| |||| |||||| Sbjct 42705 GTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCAT 42646 Query 127291 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAG 127344 ||||| || ||||| | |||| | | |||||| | | | | | || Sbjct 42645 GAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT----- 42591 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 ||||| || | ||| | ||||| |||| ||||| | |||||||| |||| ||| Sbjct 42590 -AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAG 42532 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 ||| || || || || | |||| ||||||||||| | ||||| || | ||| Sbjct 42531 AGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGAT 42472 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-C 127521 | | | || | | | ||| | ||| | | || ||| || | | ||| | Sbjct 42471 GTCCTCAACCACCTTCTTGCTAGGGCGGTTGT-TGAGGTGAGAGAACAG--CAAGCAGGC 42415 Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581 ||| || ||| |||||||| |||||||||||||| || || |||||| ||||| || Sbjct 42414 AAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 42355 Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641 ||| || || |||||||||| |||||| |||| ||| ||||||||||| ||||| || Sbjct 42354 CATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACC 42295 Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||| ||| ||||| || | ||||| | |||||||| Sbjct 42294 CTCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257 >seq127 Length=50345 Score = 105 bits (116), Expect = 8e-18 Identities = 369/566 (65%), Gaps = 15/566 (3%) Strand=Plus/Plus Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || |||||||| | ||| | ||| ||||||||||||||||||| || || || || Sbjct 26318 GGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTC 26377 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 ||||| || |||| | ||| ||| | ||||||| | || || || ||| | Sbjct 26378 CAGAGAGCGTAGAACAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGG 26437 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 ||||| || || | || ||| | |||||| || ||||| || | || | || | ||| Sbjct 26438 TCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CACCT-- 26494 Query 116902 CGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 |||| ||| |||||| || || || || || || || ||||| ||||| Sbjct 26495 GGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATG 26554 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGAC 117014 |||| || |||| ||| |||||| || || | ||| || || || |||| | || Sbjct 26555 GGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTG-TGGCAC-GAA 26612 Query 117015 ATCG-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 || |||| || | ||||||||| || || ||| || || || ||| | | | Sbjct 26613 TGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCA 26672 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133 | || ||||||| || || || ||| |||| | | | | ||||||| | || Sbjct 26673 GTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCA 26732 Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT- 117192 || ||| || |||||||| ||||| || || || | || || |||| ||| | Sbjct 26733 GCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAA-GTACTTC 26791 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 |||||||| | |||||| || | | | |||||| | |||||||| || | Sbjct 26792 TGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTCCAACG 26851 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 | || ||||| | | || |||||| Sbjct 26852 GCAACACGCATCAGGAGGTGTTGGGG 26877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613475167255320