Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq464 129 1e-24
seq81 104 6e-17
seq98 102 2e-16
>seq464
Length=17248
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| || || || || ||||||| ||||||||| | || ||| | |||||
Sbjct 12022 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 12081
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||| |||||||||||||| |||||||| || || || ||| ||
Sbjct 12082 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 12141
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| ||| |||| ||||| | | || || |||| ||||| |||
Sbjct 12142 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 12201
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || || || ||
Sbjct 12202 TTTCCAGTGAGAGTCTTGACGAAGATCTG 12230
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| ||||| |||| ||||||||| | | || | ||||||
Sbjct 11794 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 11853
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || || ||||||||||||||||||||||| || ||| || || |||
Sbjct 11854 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 11913
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||| || |||| ||||| | | || || |||| ||||| |||
Sbjct 11914 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 11973
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || |||||||| || || || ||
Sbjct 11974 TTTCCAGTTAGAGTTTTGACGAAGATCTG 12002
Score = 125 bits (138), Expect = 2e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| ||||||||||||||||||||||| | ||||||||| | | |||
Sbjct 12553 CGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTA 12612
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || |||||||||||||| || |||||||| || ||||||||||| || || ||
Sbjct 12613 CGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCC 12672
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| ||||| | | || || || |
Sbjct 12673 TCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGG 12732
Query 199589 GTGATCGTCTTACCCGTGA 199607
||||| ||||| || ||||
Sbjct 12733 GTGATGGTCTTTCCGGTGA 12751
Score = 111 bits (122), Expect = 4e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || ||||| || || || ||||| |||| ||||||||| | || |||
Sbjct 12241 CGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTG 12300
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||| ||||| || || ||||| | |||||||||||| || || ||
Sbjct 12301 CGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCC 12360
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| || || | | || || || |
Sbjct 12361 TCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGG 12420
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||||| |||||||| ||||| || || ||||
Sbjct 12421 GTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451
>seq81
Length=63167
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || || | ||||| || |||||||||||||||||||
Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||| || ||| || || ||||| ||||| ||| ||| |
Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 62902
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || || || | || || ||||||||||| || || || || |
Sbjct 62901 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 62842
Query 199620 AA 199621
||
Sbjct 62841 AA 62840
>seq98
Length=58949
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| ||||||||| | | ||| | |||||
Sbjct 32952 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 33011
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| |||||||||||||| ||
Sbjct 33012 TCGAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGG 33052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178858506694859
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |