Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq127 100 3e-16
seq60 93.3 5e-14
>seq127
Length=50345
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
||||| || | || |||| ||||| ||||| |||||| | | |||| || | |
Sbjct 25972 GGAAGCGCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATA 26031
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || || | |||||| || || || |||| |||||| ||||||||||| |||
Sbjct 26032 ATCTCAGTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTG 26091
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
|| || |||||||| || |||||| |||| | || || || ||||| | || |||||
Sbjct 26092 TTACAAGCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATA 26151
Query 106637 GCCTTCCA 106644
|| | |||
Sbjct 26152 GCATACCA 26159
>seq60
Length=71262
Score = 93.3 bits (102), Expect = 5e-14
Identities = 297/457 (65%), Gaps = 18/457 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|| || || || ||||||||||||||||||||||| ||| ||||| || |||||
Sbjct 42704 TAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATG 42645
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
|| || || || || | || || | | | || | | | || ||
Sbjct 42644 AAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT------ 42591
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
||||| || | || | ||||| |||| | ||||| | |||||||| |||| ||||
Sbjct 42590 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 42531
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| || || || || | |||| | |||||||| |||| ||||| | | ||||
Sbjct 42530 GCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATG 42471
Query 117220 GCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| | | | ||| | ||| | | | || | || ||| ||| ||||
Sbjct 42470 TCCTCAACCACCTTCTTGCTAGGGCGGTTGTTGAGGTGAGA---GAACAGCAAGCAGGCA 42414
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| ||||||||||| ||||| || || || || |||||| || || |||
Sbjct 42413 AAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGC 42354
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396
|| || || |||||||||| ||| | || | | || || || ||||| |||||||||
Sbjct 42353 ATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCC 42294
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|| ||| || || || | || || | ||| ||||
Sbjct 42293 TCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589949995627480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |