Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq464 156 9e-33 seq81 113 1e-19 seq98 96.9 8e-15 >seq464 Length=17248 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || || |||||||| || ||||| || | ||||| | ||||| || Sbjct 12025 ACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCA 12084 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| |||||||| || ||||| ||||| ||||| Sbjct 12085 AGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGG 12144 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || || ||||| || || || || || || || | |||||| Sbjct 12145 ATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTCTTT 12204 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 12205 CCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 140 bits (154), Expect = 7e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| |||||||| ||||| |||| ||||| | || ||||| Sbjct 12565 ACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCC 12624 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || ||||| || || ||||| || ||||| || Sbjct 12625 AGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 12684 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| | ||||| |||||||| | |||||| Sbjct 12685 ATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCTTT 12744 Query 195112 CCTGT 195116 || || Sbjct 12745 CCGGT 12749 >seq81 Length=63167 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || |||||||| |||||||| || ||||| || || || ||||||||| || Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 62899 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843 Query 195130 AA 195131 || Sbjct 62842 AA 62841 >seq98 Length=58949 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/127 (77%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | |||||| | ||||| ||| Sbjct 32955 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 33014 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || || || || |||||| Sbjct 33015 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT--- 33071 Query 195052 ATTTTTT 195058 ||||||| Sbjct 33072 ATTTTTT 33078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109422222971759