Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq464 118 7e-22 seq81 84.2 1e-11 >seq464 Length=17248 Score = 118 bits (130), Expect = 7e-22 Identities = 158/215 (73%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | |||||||| ||||| ||||| ||||| || || | || |||| || Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || || || ||||||||| | || | ||||||||||| | Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGA 11916 Query 34893 ATCTTCTGT-TTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||| ||||| || | ||||| ||| | |||||| || | || |||| Sbjct 11917 ATCTT-TGTCTTGAC--AT--TGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGG 11971 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| || ||||| || || |||||||||||| Sbjct 11972 TCTTTCCAGTTAGAGTTTTGACGAAGATCTGCATA 12006 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| |||||||| || | || |||| || || || ||||| || || Sbjct 12042 TTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAA 12101 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGG 34908 || || |||||||||||| | || | ||||| || || ||||| ||| |||||| Sbjct 12102 GATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGGATCTT-TGTCTTGACGT 12160 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | || | ||| || || | || ||||| ||||| ||||||||||| | Sbjct 12161 TGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGA 12220 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 12221 CGAAGATCTGCAT 12233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| ||||| ||| ||| ||||| ||||| ||||| || || | || |||| Sbjct 12249 CAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 12308 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||| || || || ||||| || | || |||||||| | || | ||||||||||| Sbjct 12309 CTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 12368 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| |||||| | || | || | | ||| || |||| ||| || || Sbjct 12369 CTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGT 12428 Query 34949 TTTTCCCGTGAGAGTCTTCACAA 34971 || || ||||| ||||| |||| Sbjct 12429 CTTACCAGTGAGGGTCTTGACAA 12451 >seq81 Length=63167 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||| | || |||| || ||||| |||||||| || || Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || ||||||||| | || | ||||||||||| ||||| |||||| | Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 || | || | | ||| || |||| ||| ||||| || ||||| || ||||| || || Sbjct 62899 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324617073816456