Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq464 95.1 1e-13
seq146 87.8 1e-11
>seq464
Length=17248
Score = 95.1 bits (104), Expect = 1e-13
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| ||||||||| |||||| || ||||| || | ||||| |
Sbjct 12016 AGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGA 12075
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||| |||||||| ||||| || || || || | |||||| || || || || || |||
Sbjct 12076 CCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCT 12135
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
|||||||| || ||| || || || ||||| || | | | || || || ||
Sbjct 12136 TTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGAC-CTCCAGTGT 12194
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || || ||||| ||||| || ||||| || |||||
Sbjct 12195 GATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
>seq146
Length=46654
Score = 87.8 bits (96), Expect = 1e-11
Identities = 109/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444
|||||| || | | || || || ||||| || || || || || ||| || |||||
Sbjct 16253 AAGAAGGTTGAGAAGGCTGTCATCACTGTGCCCGCCTACTTCAACGACAACCAGCGTCAG 16312
Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504
||||| || ||||| || ||| | || || |||||||| ||||| ||||| |||||
Sbjct 16313 GCTACCAAGGATGCGGGTGCCATTTCCGGTCTCAATGTTCTCCGTATCATCAACGAACCC 16372
Query 550505 ACTGCTGCTGCACTTGCATATGGACTTG 550532
||||||||||| |||| || || ||||
Sbjct 16373 ACTGCTGCTGCCATTGCTTACGGTCTTG 16400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029075101401730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |