Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq464 95.1 1e-13 seq146 87.8 1e-11 >seq464 Length=17248 Score = 95.1 bits (104), Expect = 1e-13 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| ||||||||| |||||| || ||||| || | ||||| | Sbjct 12016 AGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGA 12075 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| |||||||| ||||| || || || || | |||||| || || || || || ||| Sbjct 12076 CCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCT 12135 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 |||||||| || ||| || || || ||||| || | | | || || || || Sbjct 12136 TTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGAC-CTCCAGTGT 12194 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || ||||| ||||| || ||||| || ||||| Sbjct 12195 GATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 >seq146 Length=46654 Score = 87.8 bits (96), Expect = 1e-11 Identities = 109/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 |||||| || | | || || || ||||| || || || || || ||| || ||||| Sbjct 16253 AAGAAGGTTGAGAAGGCTGTCATCACTGTGCCCGCCTACTTCAACGACAACCAGCGTCAG 16312 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 ||||| || ||||| || ||| | || || |||||||| ||||| ||||| ||||| Sbjct 16313 GCTACCAAGGATGCGGGTGCCATTTCCGGTCTCAATGTTCTCCGTATCATCAACGAACCC 16372 Query 550505 ACTGCTGCTGCACTTGCATATGGACTTG 550532 ||||||||||| |||| || || |||| Sbjct 16373 ACTGCTGCTGCCATTGCTTACGGTCTTG 16400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029075101401730