Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq464 84.2 2e-11 >seq464 Length=17248 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||||| ||||| || || || || ||||| || || || | || | || || Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| ||||| || || || || ||||| || || | |||| ||||||||||| | Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGA 11916 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || ||| | | | || || ||| ||||||| || || || ||| Sbjct 11917 ATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTT 11976 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | |||||| || || |||||||| Sbjct 11977 CCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380918207538171