Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq60 132 9e-26
>seq60
Length=71262
Score = 132 bits (146), Expect = 9e-26
Identities = 299/441 (68%), Gaps = 15/441 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| | |||||||||||||| ||||| || | | ||||| |||
Sbjct 42708 CTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTC 42649
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
|||||| ||||||||||| | || | | | ||| ||| | ||||
Sbjct 42648 CATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTT--GCCGAGAGCGACCAGT 42591
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| | || || ||| | || || || | |||| || || ||||||||| | |||
Sbjct 42590 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 42531
Query 48017 GACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||| |||| ||||| ||| || ||||||||||| || || || || | ||
Sbjct 42530 G-CACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGAT 42472
Query 48076 CTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
| || ||| || || || | |||||| ||||| | | |||| |||
Sbjct 42471 GTCCTCAACCACCTTCTTGCTAGGGCGGTTGTTG---AGGTGAGAGA---ACAGCAAGCA 42418
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||||||||| |||| | || || || ||| ||||||| ||||||||||| ||||||
Sbjct 42417 GGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 42358
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
|||||| | || | || || |||||||| || | || || ||||||||||| |||||
Sbjct 42357 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGAT 42298
Query 48253 GCCCTCCACTGCCGCGAACGC 48273
||||| || || ||||| ||
Sbjct 42297 ACCCTCAACAGCAGCGAAAGC 42277
Score = 102 bits (112), Expect = 2e-16
Identities = 173/249 (69%), Gaps = 5/249 (2%)
Strand=Plus/Minus
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|||| ||| | ||||| || |||||||| ||||||||| | || ||| |||
Sbjct 42060 TCAGCGTGGATGTTCTCAATCATAATCTGGAATCCGTAGAAGCAACGAGCTTCAGGAACC 42001
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
||||| || | || | ||| ||||| ||||| ||||| || || || ||||| |||
Sbjct 42000 TGCACCTCACCGCTAAAGCGCTCGAGCAGGTTCTCGTTGACAATACCGTCGGAAGCGGCA 41941
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCA 48606
|| |||||||||||| | | ||| ||||||| || | |||| || |||||
Sbjct 41940 AAAAAGGCAAGGACACGGGAGATGAAGAAACGCTCGTCGTCGTTGAG-GCGGTTGTTCCA 41882
Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666
| | || | |||||| || || | |||||| |||||||||| || || |||||
Sbjct 41881 GTCGTGGAGATCTTTGGAAAGATCGATTTCTTCGGCAGTCCAGAAAGAGGCCTCGGCTTT 41822
Query 48667 TTTGTACAT 48675
||||||||
Sbjct 41821 CTTGTACAT 41813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931484162343680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |