Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq60 132 9e-26 >seq60 Length=71262 Score = 132 bits (146), Expect = 9e-26 Identities = 299/441 (68%), Gaps = 15/441 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | |||||||||||||| ||||| || | | ||||| ||| Sbjct 42708 CTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTC 42649 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 |||||| ||||||||||| | || | | | ||| ||| | |||| Sbjct 42648 CATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTT--GCCGAGAGCGACCAGT 42591 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || || ||| | || || || | |||| || || ||||||||| | ||| Sbjct 42590 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 42531 Query 48017 GACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | ||| |||| ||||| ||| || ||||||||||| || || || || | || Sbjct 42530 G-CACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGAT 42472 Query 48076 CTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 | || ||| || || || | |||||| ||||| | | |||| ||| Sbjct 42471 GTCCTCAACCACCTTCTTGCTAGGGCGGTTGTTG---AGGTGAGAGA---ACAGCAAGCA 42418 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| |||| | || || || ||| ||||||| ||||||||||| |||||| Sbjct 42417 GGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 42358 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||| | || | || || |||||||| || | || || ||||||||||| ||||| Sbjct 42357 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGAT 42298 Query 48253 GCCCTCCACTGCCGCGAACGC 48273 ||||| || || ||||| || Sbjct 42297 ACCCTCAACAGCAGCGAAAGC 42277 Score = 102 bits (112), Expect = 2e-16 Identities = 173/249 (69%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 |||| ||| | ||||| || |||||||| ||||||||| | || ||| ||| Sbjct 42060 TCAGCGTGGATGTTCTCAATCATAATCTGGAATCCGTAGAAGCAACGAGCTTCAGGAACC 42001 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 ||||| || | || | ||| ||||| ||||| ||||| || || || ||||| ||| Sbjct 42000 TGCACCTCACCGCTAAAGCGCTCGAGCAGGTTCTCGTTGACAATACCGTCGGAAGCGGCA 41941 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCA 48606 || |||||||||||| | | ||| ||||||| || | |||| || ||||| Sbjct 41940 AAAAAGGCAAGGACACGGGAGATGAAGAAACGCTCGTCGTCGTTGAG-GCGGTTGTTCCA 41882 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | || | |||||| || || | |||||| |||||||||| || || ||||| Sbjct 41881 GTCGTGGAGATCTTTGGAAAGATCGATTTCTTCGGCAGTCCAGAAAGAGGCCTCGGCTTT 41822 Query 48667 TTTGTACAT 48675 |||||||| Sbjct 41821 CTTGTACAT 41813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931484162343680