Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq96 87.8 2e-12
>seq96
Length=59541
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357
||| || || ||||| || || || ||||||||||| ||||| || || || | | ||
Sbjct 43901 CATGTTGGCCAGCAGGGCCTGCGCAGTGCAGATGTTGCTGGTGGCCTTTTCACGGCGGAT 43842
Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417
|||||| ||||| || || || || |||| | ||| | ||||| | |||| ||
Sbjct 43841 ATGCTGTTCTCTGGTCTGGAGCGCCAATCGCAAGGCACGGTTGCCCAGACGGTCCTTGGA 43782
Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477
| ||| || | | ||| || | ||| | ||| |||| ||| | || ||||| ||
Sbjct 43781 CACACCCACCACCCGGCCGGGGACCTTGCGCTTGTACTGGTCGGCACAGGCGAAGAAGGC 43722
Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACC 139515
||||| ||||| || || ||||| || | || ||||
Sbjct 43721 GGCATGCGGACCACCATAGCCCATGGGGACGCCGAACC 43684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578968169046040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |