Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq127 136 5e-27 seq60 93.3 5e-14 >seq127 Length=50345 Score = 136 bits (150), Expect = 5e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | |||||||| | | ||||| || ||||||| || | ||||| || |||| Sbjct 26161 TTTGGTATGCTATTCTGGAGGCCCAGACTGAAACTGGAAACCCCTTCATGCTGTATAAGG 26102 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 ||||||||||||||||||||||||| |||||| ||||||| ||| ||||| || |||| Sbjct 26101 ATGCTTGTAACAAGAAGAGTAACCAGAAGAATCTGGGAACTATCCGCAGCTCCAACCTTT 26042 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 |||| || ||| | || |||| | | |||||| ||||| ||||| |||| || Sbjct 26041 GCACTGAGATTATTGAATACAGTGCTCCTGATGAGGTTGCTGTCTGCAACCTGGCTTCGC 25982 Query 76056 TCGCCCTTCC 76065 | || ||||| Sbjct 25981 TTGCGCTTCC 25972 >seq60 Length=71262 Score = 93.3 bits (102), Expect = 5e-14 Identities = 297/457 (65%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||| | || || | || || || ||| ||||||||||| ||||| || || | Sbjct 42257 CCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCT 42316 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | | || | ||| |||||||||| || || ||||| || || |||||| || | Sbjct 42317 TTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACG 42376 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || || ||||| ||||||||||| ||| || |||||| ||| ||| || Sbjct 42377 AGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTC---TCTC 42433 Query 65249 TGCGTAATAGACCCACTACC--GAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | || | | | ||| | ||| | | | | |||| | | ||||| |||| | Sbjct 42434 ACCTCAACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCA 42493 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 ||||||| | |||| | || || || || ||| |||| |||| |||||||| | Sbjct 42494 TTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATC 42553 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCA 65424 ||||| | |||| ||||| | || | || ||||| || || | | | || Sbjct 42554 TGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCT------ACTGGTCGCTCTCGGCA 42607 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | || || | || || || || || ||||| || ||||| || Sbjct 42608 ACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTG 42667 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||||||||||||||||||||| || || || || Sbjct 42668 GCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTA 42704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596538451609760