Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq127 136 5e-27
seq60 93.3 5e-14
>seq127
Length=50345
Score = 136 bits (150), Expect = 5e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935
||||| | |||||||| | | ||||| || ||||||| || | ||||| || ||||
Sbjct 26161 TTTGGTATGCTATTCTGGAGGCCCAGACTGAAACTGGAAACCCCTTCATGCTGTATAAGG 26102
Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995
||||||||||||||||||||||||| |||||| ||||||| ||| ||||| || ||||
Sbjct 26101 ATGCTTGTAACAAGAAGAGTAACCAGAAGAATCTGGGAACTATCCGCAGCTCCAACCTTT 26042
Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055
|||| || ||| | || |||| | | |||||| ||||| ||||| |||| ||
Sbjct 26041 GCACTGAGATTATTGAATACAGTGCTCCTGATGAGGTTGCTGTCTGCAACCTGGCTTCGC 25982
Query 76056 TCGCCCTTCC 76065
| || |||||
Sbjct 25981 TTGCGCTTCC 25972
>seq60
Length=71262
Score = 93.3 bits (102), Expect = 5e-14
Identities = 297/457 (65%), Gaps = 18/457 (4%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| ||| | || || | || || || ||| ||||||||||| ||||| || || |
Sbjct 42257 CCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCT 42316
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
| | | || | ||| |||||||||| || || ||||| || || |||||| || |
Sbjct 42317 TTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACG 42376
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248
| || || ||||| ||||||||||| ||| || |||||| ||| ||| ||
Sbjct 42377 AGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTC---TCTC 42433
Query 65249 TGCGTAATAGACCCACTACC--GAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305
| || | | | ||| | ||| | | | | |||| | | ||||| |||| |
Sbjct 42434 ACCTCAACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCA 42493
Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365
||||||| | |||| | || || || || ||| |||| |||| |||||||| |
Sbjct 42494 TTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATC 42553
Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCA 65424
||||| | |||| ||||| | || | || ||||| || || | | | ||
Sbjct 42554 TGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCT------ACTGGTCGCTCTCGGCA 42607
Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479
| | | || || | || || || || || ||||| || ||||| ||
Sbjct 42608 ACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTG 42667
Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
| ||||||||||||||||||||||| || || || ||
Sbjct 42668 GCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTA 42704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596538451609760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |