Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq312 127 6e-24
seq127 105 2e-17
seq60 93.3 1e-13
seq677 91.5 4e-13
seq286 91.5 4e-13
seq346 87.8 5e-12
>seq312
Length=28460
Score = 127 bits (140), Expect = 6e-24
Identities = 193/273 (71%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655
|||||||| ||||| ||| | || || |||||||||||||| ||||| | ||||||
Sbjct 5369 CGCTGAATGTAACCGGTTTCCGCAGTCTTGACAGCTGTATCAATCAGACCTTCTCGACCA 5310
Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715
||||||| |||||||| | ||| ||| ||| || | || | ||| |||||||
Sbjct 5309 GCCATAGCGTGGAAGAAGAACTCCGTCGGAGTTAGACCACGAAGGTAAGAGTTCTCAACA 5250
Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775
|| || | | || || |||| |||| ||| |||||||| |||| ||| | | ||
Sbjct 5249 AAGCCCCTGGATTCTGGGGAATAGTCGTCCTTTGTAAAGTGCGGCAAGGTACGATACTTG 5190
Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835
| || | || ||||| || || || || ||||||||| | | | | ||||||||
Sbjct 5189 AAACCAAAAGGAATACGTTTACCCTCCACCGACTGCTGTCCAACGACAGCAGTCATCTGC 5130
Query 302836 GAAATATTTAAATCACTG--CCCTTGGAGCCAG 302866
|||||||| ||| || |||||||| ||||
Sbjct 5129 GAAATATT--AATAGTTGAACCCTTGGATCCAG 5099
Score = 98.7 bits (108), Expect = 3e-15
Identities = 106/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| ||| || | |||||||||
Sbjct 6167 AGAATTTCCTTCAGACGAGGGACACCAAGGGTAACGTT---CTTTGAGGAGACACCAGCA 6111
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||||||| ||||| || | ||||||| ||||||||||| || || ||||
Sbjct 6110 AAGTGGAAAGTGTTCAGCGTCATCTGAGTAGCGGGCTCACCAATGGACTGGGCGGCAAGA 6051
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||||||||| || || ||
Sbjct 6050 ACACCAACCATCTCACCAGG 6031
>seq127
Length=50345
Score = 105 bits (116), Expect = 2e-17
Identities = 200/291 (69%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
|| |||| ||| || | |||| | ||| | ||| ||||| | || | || | ||||
Sbjct 26351 ACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGC-TCTGAC 26409
Query 155970 TCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
| || | | ||||| ||||| || || || ||||| || | ||| | || ||
Sbjct 26410 TTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGG 26469
Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085
||||||||| || ||||| ||| | |||| |||||||| || || || | |||
Sbjct 26470 CTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGC 26529
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
||| |||||||| || | ||||| |||| ||| |||||||| | ||||||||| ||||
Sbjct 26530 AGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCC 26589
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACC 156196
||| | ||||| | | |||| ||| | | || |||||||||||
Sbjct 26590 AATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCAATACCACC 26640
Score = 96.9 bits (106), Expect = 1e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
|||||||| | ||||||| ||| ||||| || || ||| || || | ||||||||||
Sbjct 26020 CTGTATTCAATAATCTCAGTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGG 26079
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||||||||||||||| || || ||| | ||| |||| || || ||||
Sbjct 26080 TTACTCTTCTTGTTACAAGCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGG 26139
Query 155748 GCGTCCAGAAT 155758
|| ||||||||
Sbjct 26140 GCCTCCAGAAT 26150
>seq60
Length=71262
Score = 93.3 bits (102), Expect = 1e-13
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493
|| |||| || |||| ||||| || | |||||| | | ||||||||||| ||
Sbjct 42194 AAGTTCCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAAT 42253
Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553
| | ||||| |||||||| ||||| |||| || ||||| || |||||| |||
Sbjct 42254 CTACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCT 42313
Query 133554 CGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTA 133613
| || ||| || || ||||| || |||||||| | | ||||| || || || |
Sbjct 42314 CCTTTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCA 42373
Query 133614 ACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|||| || || || | || |||| |||||||| || ||||||
Sbjct 42374 ACGAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCC 42417
>seq677
Length=8447
Score = 91.5 bits (100), Expect = 4e-13
Identities = 232/340 (68%), Gaps = 11/340 (3%)
Strand=Plus/Plus
Query 288891 ATCGGCTCTGTTTGTTGCTGCCAATACAACAA-TAGATTCGGTTTGCTTAAATCCATCCA 288949
||||| |||||| || | |||| ||||| | | ||| ||| || || |||||||
Sbjct 253 ATCGGGTCTGTTAGTACCAGCCAGGACAACCACTTGAT-CGGACGTATTGAAGCCATCCA 311
Query 288950 TACTTGTTAAA-ATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCA 289008
| || | ||| |||||||| || || |||| ||||| ||| ||| | ||| |
Sbjct 312 T-CTCGGTAAGGATTTGATTCAGGGTGCTCTCCCGCTCATCGTTTCCACCCCC-GAAACT 369
Query 289009 CCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGA 289068
| | |||||| ||| ||||| ||||| || |||||||||||||| | ||| ||
Sbjct 370 CT-GCTTCGCTCGAGATTT-ACCAATGGCATCGATCTCGTCAATGAAAATGATACAAGGG 427
Query 289069 GAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATAC 289128
| || | | ||| | || || || || | |||||||| | || | ||||||| ||
Sbjct 428 GTGTTCTTGCGGGCATTGGCGAACAAGTCACGGACACGGGAAGGACCGACACCAACAAAC 487
Query 289129 ATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTA 289186
|| || || || || ||| || || || |||| ||| | ||| | ||| || ||
Sbjct 488 ATCTCAACGAACTCGGAACCGCTGACAC-TGAA-GAAAGGCACACCCGATTCACCGGCCG 545
Query 289187 CTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
||| | || || ||||||||||| || ||||| |||||
Sbjct 546 TGGCCTTAGCAAGCAGTGTCTTACCAGTACCAGGAGGTCC 585
>seq286
Length=30336
Score = 91.5 bits (100), Expect = 4e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||| | ||| || |||| |||||| | ||||| | | |||| ||||| ||||| |
Sbjct 22498 CTTCCATGCCCTTAATCAAACAACGCTGCAAGTAACCTGATCTAGAGGTTTTCACAGCAG 22557
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
||||||||||||| |||||||| |||| || ||||||
Sbjct 22558 TATCAATTAGACCCTCACGACCAGCCATGGCGTGGAAG 22595
>seq346
Length=25528
Score = 87.8 bits (96), Expect = 5e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| || |||| ||||||||||| || ||||| || |||||||||||||||||||| |||
Sbjct 5617 GCTCCATGTGCGATCATACAATCGCGTTCCATCTCTCCGAAACGAAGACCACCATCACGA 5676
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570
|| | ||| || ||||||| |||||
Sbjct 5677 GCACGACCTTCCACAGGCTGTCGAGT 5702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471738831541649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |