Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq312 127 6e-24 seq127 105 2e-17 seq60 93.3 1e-13 seq677 91.5 4e-13 seq286 91.5 4e-13 seq346 87.8 5e-12 >seq312 Length=28460 Score = 127 bits (140), Expect = 6e-24 Identities = 193/273 (71%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 |||||||| ||||| ||| | || || |||||||||||||| ||||| | |||||| Sbjct 5369 CGCTGAATGTAACCGGTTTCCGCAGTCTTGACAGCTGTATCAATCAGACCTTCTCGACCA 5310 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715 ||||||| |||||||| | ||| ||| ||| || | || | ||| ||||||| Sbjct 5309 GCCATAGCGTGGAAGAAGAACTCCGTCGGAGTTAGACCACGAAGGTAAGAGTTCTCAACA 5250 Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775 || || | | || || |||| |||| ||| |||||||| |||| ||| | | || Sbjct 5249 AAGCCCCTGGATTCTGGGGAATAGTCGTCCTTTGTAAAGTGCGGCAAGGTACGATACTTG 5190 Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835 | || | || ||||| || || || || ||||||||| | | | | |||||||| Sbjct 5189 AAACCAAAAGGAATACGTTTACCCTCCACCGACTGCTGTCCAACGACAGCAGTCATCTGC 5130 Query 302836 GAAATATTTAAATCACTG--CCCTTGGAGCCAG 302866 |||||||| ||| || |||||||| |||| Sbjct 5129 GAAATATT--AATAGTTGAACCCTTGGATCCAG 5099 Score = 98.7 bits (108), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| ||| || | ||||||||| Sbjct 6167 AGAATTTCCTTCAGACGAGGGACACCAAGGGTAACGTT---CTTTGAGGAGACACCAGCA 6111 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| ||||| || | ||||||| ||||||||||| || || |||| Sbjct 6110 AAGTGGAAAGTGTTCAGCGTCATCTGAGTAGCGGGCTCACCAATGGACTGGGCGGCAAGA 6051 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||||||||| || || || Sbjct 6050 ACACCAACCATCTCACCAGG 6031 >seq127 Length=50345 Score = 105 bits (116), Expect = 2e-17 Identities = 200/291 (69%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 || |||| ||| || | |||| | ||| | ||| ||||| | || | || | |||| Sbjct 26351 ACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGC-TCTGAC 26409 Query 155970 TCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 | || | | ||||| ||||| || || || ||||| || | ||| | || || Sbjct 26410 TTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGG 26469 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||||||||| || ||||| ||| | |||| |||||||| || || || | ||| Sbjct 26470 CTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGC 26529 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| |||||||| || | ||||| |||| ||| |||||||| | ||||||||| |||| Sbjct 26530 AGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCC 26589 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACC 156196 ||| | ||||| | | |||| ||| | | || ||||||||||| Sbjct 26590 AATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCAATACCACC 26640 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 |||||||| | ||||||| ||| ||||| || || ||| || || | |||||||||| Sbjct 26020 CTGTATTCAATAATCTCAGTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGG 26079 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || |||||||||||||||| || || ||| | ||| |||| || || |||| Sbjct 26080 TTACTCTTCTTGTTACAAGCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGG 26139 Query 155748 GCGTCCAGAAT 155758 || |||||||| Sbjct 26140 GCCTCCAGAAT 26150 >seq60 Length=71262 Score = 93.3 bits (102), Expect = 1e-13 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493 || |||| || |||| ||||| || | |||||| | | ||||||||||| || Sbjct 42194 AAGTTCCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAAT 42253 Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553 | | ||||| |||||||| ||||| |||| || ||||| || |||||| ||| Sbjct 42254 CTACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCT 42313 Query 133554 CGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTA 133613 | || ||| || || ||||| || |||||||| | | ||||| || || || | Sbjct 42314 CCTTTGCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCA 42373 Query 133614 ACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 |||| || || || | || |||| |||||||| || |||||| Sbjct 42374 ACGAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCC 42417 >seq677 Length=8447 Score = 91.5 bits (100), Expect = 4e-13 Identities = 232/340 (68%), Gaps = 11/340 (3%) Strand=Plus/Plus Query 288891 ATCGGCTCTGTTTGTTGCTGCCAATACAACAA-TAGATTCGGTTTGCTTAAATCCATCCA 288949 ||||| |||||| || | |||| ||||| | | ||| ||| || || ||||||| Sbjct 253 ATCGGGTCTGTTAGTACCAGCCAGGACAACCACTTGAT-CGGACGTATTGAAGCCATCCA 311 Query 288950 TACTTGTTAAA-ATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCA 289008 | || | ||| |||||||| || || |||| ||||| ||| ||| | ||| | Sbjct 312 T-CTCGGTAAGGATTTGATTCAGGGTGCTCTCCCGCTCATCGTTTCCACCCCC-GAAACT 369 Query 289009 CCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGA 289068 | | |||||| ||| ||||| ||||| || |||||||||||||| | ||| || Sbjct 370 CT-GCTTCGCTCGAGATTT-ACCAATGGCATCGATCTCGTCAATGAAAATGATACAAGGG 427 Query 289069 GAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATAC 289128 | || | | ||| | || || || || | |||||||| | || | ||||||| || Sbjct 428 GTGTTCTTGCGGGCATTGGCGAACAAGTCACGGACACGGGAAGGACCGACACCAACAAAC 487 Query 289129 ATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTA 289186 || || || || || ||| || || || |||| ||| | ||| | ||| || || Sbjct 488 ATCTCAACGAACTCGGAACCGCTGACAC-TGAA-GAAAGGCACACCCGATTCACCGGCCG 545 Query 289187 CTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||| | || || ||||||||||| || ||||| ||||| Sbjct 546 TGGCCTTAGCAAGCAGTGTCTTACCAGTACCAGGAGGTCC 585 >seq286 Length=30336 Score = 91.5 bits (100), Expect = 4e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||| | ||| || |||| |||||| | ||||| | | |||| ||||| ||||| | Sbjct 22498 CTTCCATGCCCTTAATCAAACAACGCTGCAAGTAACCTGATCTAGAGGTTTTCACAGCAG 22557 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||||||||||||| |||||||| |||| || |||||| Sbjct 22558 TATCAATTAGACCCTCACGACCAGCCATGGCGTGGAAG 22595 >seq346 Length=25528 Score = 87.8 bits (96), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || || |||| ||||||||||| || ||||| || |||||||||||||||||||| ||| Sbjct 5617 GCTCCATGTGCGATCATACAATCGCGTTCCATCTCTCCGAAACGAAGACCACCATCACGA 5676 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570 || | ||| || ||||||| ||||| Sbjct 5677 GCACGACCTTCCACAGGCTGTCGAGT 5702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471738831541649