Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq205 134 2e-25
seq60 122 1e-21
seq45 122 1e-21
seq127 91.5 2e-12
>seq205
Length=39069
Score = 134 bits (148), Expect = 2e-25
Identities = 120/149 (81%), Gaps = 1/149 (1%)
Strand=Plus/Plus
Query 19037 GCGCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG 19095
||| ||| || |||||||||||||| || || || |||||| |||||||| || | |
Sbjct 22512 GCGACAACAGCGACAGCATCGGCGGTACCGTCACCTGCGTGATCCGCAACGTCCCCGTCG 22571
Query 19096 GCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGA 19155
|||| |||||||| ||||| |||||| |||||||| ||| |||||||||||||| |
Sbjct 22572 GCCTGGGCGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTGGCCCACGCCATGCTCAGCA 22631
Query 19156 TCCCGGCCACCAAGGGATTCGAGATTGGC 19184
|||| ||||||||||| ||||| || |||
Sbjct 22632 TCCCCGCCACCAAGGGCTTCGAAATCGGC 22660
>seq60
Length=71262
Score = 122 bits (134), Expect = 1e-21
Identities = 172/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || ||||| ||| ||| || |||||||||||||| | || |||||
Sbjct 42713 GCCTTCTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATA 42654
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | |
Sbjct 42653 GACTCCATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACC 42594
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || |||||||| || || || || ||||||||||| || || ||||||||||| |
Sbjct 42593 AGTAGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGG 42534
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||||| | ||| ||| ||||| ||||| || | || ||||| | ||||
Sbjct 42533 AGAGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATG 42474
Query 868931 AT 868932
||
Sbjct 42473 AT 42472
>seq45
Length=79018
Score = 122 bits (134), Expect = 1e-21
Identities = 96/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||| || |||||| |||| ||||| | || |||||| | || ||||||
Sbjct 68158 GCCGCCAACTACCTTGATATCAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAC 68217
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
|||||||||||||| || ||||| ||||| ||||||||||| ||||| || |||
Sbjct 68218 ATGATCAAGGGCAAATCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 68272
>seq127
Length=50345
Score = 91.5 bits (100), Expect = 2e-12
Identities = 200/300 (67%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | || |||| || || ||||| |||||||| || | || |||||
Sbjct 26512 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 26571
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||| ||||| || | | ||| | || | ||| || | || || | ||
Sbjct 26572 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACC 26631
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || ||||| | |||||| || | || ||| || || |||||||||||||||||
Sbjct 26632 AATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTC 26691
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| || | ||||| || | || || || | || ||
Sbjct 26692 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACC 26751
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| ||||| || ||||| | || ||||| ||| | | |||||| || ||||||
Sbjct 26752 AGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGT 26811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106796415819109
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |