Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq205 134 2e-25 seq60 122 1e-21 seq45 122 1e-21 seq127 91.5 2e-12 >seq205 Length=39069 Score = 134 bits (148), Expect = 2e-25 Identities = 120/149 (81%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 19037 GCGCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG 19095 ||| ||| || |||||||||||||| || || || |||||| |||||||| || | | Sbjct 22512 GCGACAACAGCGACAGCATCGGCGGTACCGTCACCTGCGTGATCCGCAACGTCCCCGTCG 22571 Query 19096 GCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGA 19155 |||| |||||||| ||||| |||||| |||||||| ||| |||||||||||||| | Sbjct 22572 GCCTGGGCGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTGGCCCACGCCATGCTCAGCA 22631 Query 19156 TCCCGGCCACCAAGGGATTCGAGATTGGC 19184 |||| ||||||||||| ||||| || ||| Sbjct 22632 TCCCCGCCACCAAGGGCTTCGAAATCGGC 22660 >seq60 Length=71262 Score = 122 bits (134), Expect = 1e-21 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| ||| || |||||||||||||| | || ||||| Sbjct 42713 GCCTTCTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATA 42654 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | | Sbjct 42653 GACTCCATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACC 42594 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || |||||||| || || || || ||||||||||| || || ||||||||||| | Sbjct 42593 AGTAGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGG 42534 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | ||| ||| ||||| ||||| || | || ||||| | |||| Sbjct 42533 AGAGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATG 42474 Query 868931 AT 868932 || Sbjct 42473 AT 42472 >seq45 Length=79018 Score = 122 bits (134), Expect = 1e-21 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| || |||||| |||| ||||| | || |||||| | || |||||| Sbjct 68158 GCCGCCAACTACCTTGATATCAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAC 68217 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || ||||| ||||| ||||||||||| ||||| || ||| Sbjct 68218 ATGATCAAGGGCAAATCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 68272 >seq127 Length=50345 Score = 91.5 bits (100), Expect = 2e-12 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| || || ||||| |||||||| || | || ||||| Sbjct 26512 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 26571 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| ||||| || | | ||| | || | ||| || | || || | || Sbjct 26572 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACC 26631 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | |||||| || | || ||| || || ||||||||||||||||| Sbjct 26632 AATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTC 26691 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| || | ||||| || | || || || | || || Sbjct 26692 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACC 26751 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || ||||| | || ||||| ||| | | |||||| || |||||| Sbjct 26752 AGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGT 26811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106796415819109