Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq127 120 3e-22 seq464 109 5e-19 >seq127 Length=50345 Score = 120 bits (132), Expect = 3e-22 Identities = 464/716 (65%), Gaps = 25/716 (3%) Strand=Plus/Plus Query 139305 GTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGA-AAGATCGCGACAC 139362 |||||||||||| || | ||||| |||| | |||||| | |||| ||| | | | | Sbjct 26254 GTACTTTTCGTAAAGAGCATCGAACTCGT-CGCCGTAGACATCAGCCAAGCCAGGGGC-C 26311 Query 139363 TTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCC 139422 | | ||| || | ||| | ||| | ||||| |||| || ||| ||||||||||||| Sbjct 26312 TCGCTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCA 26371 Query 139423 GGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTAC 139480 ||| |||| | |||| | | |||||| || || ||| | |||||| || ||| Sbjct 26372 GGAGTCCAGAGAGCGTAGAACAAATCACGAGC--TCTGACTTCTTCCTTTCCGTGGTT-- 26427 Query 139481 GTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 || | | || | ||| ||||| || || | |||||| || |||||||| ||||| | Sbjct 26428 CTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAA 26487 Query 139539 TGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595 ||| ||| || ||| ||||| || || |||| || ||| |||||||| ||||| Sbjct 26488 TGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCG 26547 Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCG 139652 || ||| || | | || | | || || ||||| | | ||| | || || Sbjct 26548 CAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTG-- 26605 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || || | | ||| || |||| || || || ||| || ||||| || | | ||| Sbjct 26606 -GCACGAATGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATA--GCA 26662 Query 139713 ATCGCGT--AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAG 139770 || | | ||| ||||| || || |||||||| |||| ||| |||| ||| Sbjct 26663 CACGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAG 26722 Query 139771 CATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTG 139830 || || | || || || | || || || |||||||| || || || ||| Sbjct 26723 CAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTG 26782 Query 139831 AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890 || | | ||||| | | ||| ||||| | ||| || |||| || | ||||| Sbjct 26783 AAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGA 26842 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950 || || || | || |||||||| | |||||| || ||||| ||| ||| | || Sbjct 26843 ATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGA 26902 Query 139951 tttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || ||| ||| ||||| ||| | |||||||| | ||||| || || Sbjct 26903 CGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTAGTTGTAGTTAAAGTC 26958 >seq464 Length=17248 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || || | | Sbjct 12234 GATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTC 12175 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||||| | || |||| || ||||| ||||||||| ||||| || || || || || | Sbjct 12174 CGACACAATCGACAACGTCAAGACAAA-GATCCAAGATAAAGAGGGCATCCCACCAGACC 12116 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||||| | ||||| || || || || || |||||| | | |||| || || | Sbjct 12115 AGCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACA 12056 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| ||||| ||||| || || ||| | ||| | || |||| || || Sbjct 12055 ACATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGG 12007 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || ||||| ||||| || ||||| || || | | ||| || | || ||| Sbjct 12446 AAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCGACAAC 12387 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | || || || ||| || ||||| || || || || || || || || ||||||||||| Sbjct 12386 GTCAAGACCAA-GATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTT 12328 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||| || || || ||||||||| | | |||| || || ||||| || |||||||| Sbjct 12327 TGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAATC 12268 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| |||| |||| |||| || || Sbjct 12267 CACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 12235 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || || || || || | | Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||| || ||||| || || || || || || || Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 11886 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || |||||||| || ||| | | | | || || || ||| Sbjct 11885 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 11826 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||| || |||||| |||| Sbjct 11825 ATCCAGAAGGAAAGCACTCTACACCTGGT 11797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449874109721560