Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq60 127 3e-23 seq45 118 2e-20 seq127 91.5 2e-12 >seq60 Length=71262 Score = 127 bits (140), Expect = 3e-23 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || ||||| ||| ||| || |||||||||||||| | || ||||| ||||||| Sbjct 42704 TAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATG 42645 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | | ||| ||||| | ||||| | | || || ||| Sbjct 42644 AAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGTAGACGG 42585 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||| ||||||||||| ||||||||||| || || ||||||||||| ||| || Sbjct 42584 TCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGAGCACAA 42525 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||||| | ||| | | ||||| ||||| || | || ||||| |||||||| Sbjct 42524 GGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGAT 42472 >seq45 Length=79018 Score = 118 bits (130), Expect = 2e-20 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| || |||||| | |||||||| | || ||||||||||| |||||| Sbjct 68158 GCCGCCAACTACCTTGATATCAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAC 68217 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || ||||| || || ||||||||||| ||||| || ||| Sbjct 68218 ATGATCAAGGGCAAATCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 68272 >seq127 Length=50345 Score = 91.5 bits (100), Expect = 2e-12 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| || || ||||| |||||||| |||| || ||||| Sbjct 26512 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 26571 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| ||||| || | | ||| | || | ||| || | || || | || Sbjct 26572 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACC 26631 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | |||||| || | || ||| | ||||| || |||||||||||||| Sbjct 26632 AATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTC 26691 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||| || | || || | | || || Sbjct 26692 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACC 26751 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 |||||||| || ||||| | || ||| | ||| ||||||||| | |||||| Sbjct 26752 AGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGT 26811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915802073458703