Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq464 127 1e-24
seq81 114 8e-21
seq98 102 5e-17
>seq464
Length=17248
Score = 127 bits (140), Expect = 1e-24
Identities = 159/216 (74%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||||| |||||||| ||||| ||||| || || ||||| ||||
Sbjct 11794 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 11853
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || || || |||||||| || || ||||||||| | || | |||||||||||
Sbjct 11854 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 11913
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| ||||| || | ||||| ||| | ||| || || | || ||
Sbjct 11914 TGAATCTTTGTCTTGAC--AT--TGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGAT 11969
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||||| || || || || || |||||||||||
Sbjct 11970 GGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| || || || ||||| |||||||| || | || ||||
Sbjct 12022 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 12081
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||| |||||||| || |||||||||||| | || | ||||| || ||
Sbjct 12082 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 12141
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| |||||| | || | || | |||||| || | || ||||||
Sbjct 12142 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 12201
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || |||||||||||
Sbjct 12202 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 118 bits (130), Expect = 7e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||||| |||| |||||||| ||||| ||||| || || |||| ||||
Sbjct 12249 CAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 12308
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||||||||| || || ||||||| || |||||||| | || | |||||||||||
Sbjct 12309 CTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 12368
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | | ||| || || | ||| || ||
Sbjct 12369 CTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGT 12428
Query 34945 CTTTCCCGTGAGGGTCTTTACAA 34967
||| || ||||||||||| ||||
Sbjct 12429 CTTACCAGTGAGGGTCTTGACAA 12451
Score = 104 bits (114), Expect = 2e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | || |||||| |||||||| ||||| || || | || | ||
Sbjct 12562 AGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 12621
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 12622 TCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 12681
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | | ||| || |||| ||| ||||||
Sbjct 12682 TGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTC 12741
Query 34946 TTTCCCGTGA 34955
||||| ||||
Sbjct 12742 TTTCCGGTGA 12751
>seq81
Length=63167
Score = 114 bits (126), Expect = 8e-21
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| ||| |||| |||| || || ||||||||||||||||
Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || ||||||||| | || | ||||||||||| | || || ||||||
Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 62902
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | |||||| || | ||| |||||||| ||||| |||||||| || |
Sbjct 62901 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 62842
Query 34968 A 34968
|
Sbjct 62841 A 62841
>seq98
Length=58949
Score = 102 bits (112), Expect = 5e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| |||||||| || |||| |||| || || ||||| ||||||||
Sbjct 32972 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAA 33031
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899
|||||| || |||||||| | || | ||||||||||| || |||||| |||
Sbjct 33032 GATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTATTTTTTTTTTTTT 33085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325676219895563
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |