Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq464 123 5e-23
>seq464
Length=17248
Score = 123 bits (136), Expect = 5e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| || || | ||| || ||||||||||| || || || || || |
Sbjct 12005 TACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCG 12064
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | ||| || || ||||| |||||||| ||||| || | ||| || ||||| |
Sbjct 12065 ACAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTG 12124
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || || |||||||| ||||||| || || || || || || || || | ||
Sbjct 12125 GGATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTC-GGAGCTCTCG 12183
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||| || || ||||| || || | ||||| || || ||||||||
Sbjct 12184 ACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 104 bits (114), Expect = 5e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||||||||| | ||| || || ||||| ||||| || || || || ||
Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || || || ||||| || ||||||||||| | | || || || || ||
Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || |||||||| | || || || || || ||||| ||| || ||
Sbjct 12355 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACC 12414
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|| | || || ||||| || || | ||||| ||||
Sbjct 12415 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981774654756003
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |