Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq81 113 4e-20 seq60 104 2e-17 seq43 98.7 1e-15 seq464 96.9 3e-15 >seq81 Length=63167 Score = 113 bits (124), Expect = 4e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | |||||||||||||| || ||| | || Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAGAT 62961 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 62960 CAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 62901 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 62900 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62841 Query 133652 A 133652 | Sbjct 62840 A 62840 >seq60 Length=71262 Score = 104 bits (114), Expect = 2e-17 Identities = 282/427 (66%), Gaps = 11/427 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || |||||||| ||||| || ||||| | | || || | Sbjct 42708 CTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTC 42649 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || ||||| ||| | ||| | || || || Sbjct 42648 CATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGTAG 42589 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || || ||||| |||| |||||| || || | ||||||||| || | | Sbjct 42588 ACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTG-GAGTTCATGCCGAGGAGAG 42530 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG- 120588 | |||| ||| || | ||||||||||||||| | || ||||| ||| ||| Sbjct 42529 CACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATGT 42470 Query 120589 --GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | | || | | || || |||| | | || | | | | || ||| | Sbjct 42469 CCTCAACCACCTTCTTGCTAGGGCGGTTGT-TGAGGTGAGAGAACAG-----CAAGCAGG 42416 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||| || ||||| || || || || ||||||||| || || || || | Sbjct 42415 CAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAG 42356 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||| | ||| | |||| | |||| || | ||||||| ||| || || || | | Sbjct 42355 GCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATAC 42296 Query 120767 CCTCCAC 120773 |||| || Sbjct 42295 CCTCAAC 42289 >seq43 Length=80414 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||| | ||| |||| || |||| || ||||||||||||||| || ||| ||| Sbjct 55003 GGCTTCCACATCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCTGCTGGCCCCCAC 54944 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || || | | | || || ||||| |||||| Sbjct 54943 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCTGAGGATGAGGTCCGCCACGTTGGTGAC 54884 Query 116596 CTGGGCAAC 116604 ||||| ||| Sbjct 54883 CTGGGAAAC 54875 >seq464 Length=17248 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529 || ||||| || ||||| ||| | |||| | || || ||||| || || ||| | Sbjct 11815 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 11874 Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || || || || |||||||| |||||| ||||| | Sbjct 11875 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTG 11934 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||||| | | ||| || || | |||| ||| || || || |||||||| ||| Sbjct 11935 TCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACG 11994 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 11995 AAGATCTGCAT 12005 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || ||||||||||| ||| | || || ||||||||||| || |||||||| ||||| Sbjct 12618 GTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTT 12677 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | |||||| | | |||||| || | ||||| Sbjct 12678 GTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGAT 12737 Query 133625 GGTTTTGCCGGT 133636 ||| || ||||| Sbjct 12738 GGTCTTTCCGGT 12749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483395559391480