Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq127 122 2e-22
seq60 98.7 2e-15
>seq127
Length=50345
Score = 122 bits (134), Expect = 2e-22
Identities = 444/692 (64%), Gaps = 5/692 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| |||||||||||||| ||||| ||| |||| || | ||| |||||||| || |
Sbjct 26945 ACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGCAAGGTTG 26886
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|| ||||| |||||| | | | |||||||| |||| ||||| || |||| |||
Sbjct 26885 CCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAATGACATTG 26826
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481
| | ||||| || | | | | ||| | | |||||| | || |
Sbjct 26825 AGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCA 26766
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541
| || || || || || || || |||| || ||||| | | | || |
Sbjct 26765 CTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGA 26706
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| || || ||||| || || || || | || || |||| | ||||| || |
Sbjct 26705 AGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGA 26646
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
| || || |||||| | |||| ||| ||||| | | ||| | | || |
Sbjct 26645 CTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTTACATTGGCG 26586
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || || | || | |||| ||||||| ||| | | || ||||| ||||||| |
Sbjct 26585 GTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTA 26526
Query 110722 AATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTT 110778
||| || | || ||||| || | | || ||||||| || ||||| || ||||
Sbjct 26525 GATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATCTGGAGCCTT 26466
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
|||| || ||| | ||||| ||||| || || ||||| || || ||| |||||| |
Sbjct 26465 GGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGAAGTCA 26406
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
|||| |||||||| || || || | |||| | | ||| | |||||||| || ||| | |
Sbjct 26405 GAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGGGTTGAGG 26346
Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTT-CTCCTGGTCTATCTGATGTATAT 110957
|| || ||| | || | || ||| | || | ||||| | ||||||| ||
Sbjct 26345 CCAACGGTGACTGGACCCTCTTCTGCCCT-AGCGAGGCCCCTGGCTTGGCTGATGTCTAC 26287
Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989
|| | ||||| || | ||||||||||| ||
Sbjct 26286 GGCGACGAGTTCGATGCTCTTTACGAAAAGTA 26255
>seq60
Length=71262
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/225 (71%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842
|| || |||||| ||| ||||| || |||||||| | | ||||| || ||| |
Sbjct 42194 AAGTTCCCTGCA-TTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAA 42252
Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG- 131901
||| ||| | | | || |||||||| ||| |||||| ||||| || || || ||
Sbjct 42253 TCTACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGC 42312
Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961
| |||| | | ||||| ||||| ||||||||||| |||||||||| ||| | || ||
Sbjct 42313 TCCTTTGCCT-CGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTC 42371
Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
||| | ||||||| | ||||| | | || ||||| |||||
Sbjct 42372 CAACGAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGC 42416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186749284375097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |