Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq127 122 2e-22 seq60 98.7 2e-15 >seq127 Length=50345 Score = 122 bits (134), Expect = 2e-22 Identities = 444/692 (64%), Gaps = 5/692 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| |||||||||||||| ||||| ||| |||| || | ||| |||||||| || | Sbjct 26945 ACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGCAAGGTTG 26886 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 || ||||| |||||| | | | |||||||| |||| ||||| || |||| ||| Sbjct 26885 CCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAATGACATTG 26826 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481 | | ||||| || | | | | ||| | | |||||| | || | Sbjct 26825 AGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCA 26766 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 | || || || || || || || |||| || ||||| | | | || | Sbjct 26765 CTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGA 26706 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601 | || || ||||| || || || || | || || |||| | ||||| || | Sbjct 26705 AGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGA 26646 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | || || |||||| | |||| ||| ||||| | | ||| | | || | Sbjct 26645 CTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTTACATTGGCG 26586 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || || | || | |||| ||||||| ||| | | || ||||| ||||||| | Sbjct 26585 GTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTA 26526 Query 110722 AATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTT 110778 ||| || | || ||||| || | | || ||||||| || ||||| || |||| Sbjct 26525 GATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATCTGGAGCCTT 26466 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| || ||| | ||||| ||||| || || ||||| || || ||| |||||| | Sbjct 26465 GGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGAAGTCA 26406 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| |||||||| || || || | |||| | | ||| | |||||||| || ||| | | Sbjct 26405 GAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGGGTTGAGG 26346 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTT-CTCCTGGTCTATCTGATGTATAT 110957 || || ||| | || | || ||| | || | ||||| | ||||||| || Sbjct 26345 CCAACGGTGACTGGACCCTCTTCTGCCCT-AGCGAGGCCCCTGGCTTGGCTGATGTCTAC 26287 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 || | ||||| || | ||||||||||| || Sbjct 26286 GGCGACGAGTTCGATGCTCTTTACGAAAAGTA 26255 >seq60 Length=71262 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842 || || |||||| ||| ||||| || |||||||| | | ||||| || ||| | Sbjct 42194 AAGTTCCCTGCA-TTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAA 42252 Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG- 131901 ||| ||| | | | || |||||||| ||| |||||| ||||| || || || || Sbjct 42253 TCTACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGC 42312 Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961 | |||| | | ||||| ||||| ||||||||||| |||||||||| ||| | || || Sbjct 42313 TCCTTTGCCT-CGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTC 42371 Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 ||| | ||||||| | ||||| | | || ||||| ||||| Sbjct 42372 CAACGAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGC 42416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186749284375097