Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq464 105 4e-18 >seq464 Length=17248 Score = 105 bits (116), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||||||||||| || || || |||||||| |||||||| ||||| | || || Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| || || || || | ||||||||| ||| | || | ||| || ||||| | Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGA 11916 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGT 33716 || || ||| | |||| ||| | ||||| ||| || || || | ||||| || Sbjct 11917 ATCTT-TGTCTTGACATTGTCGATTGTGTCAGAGCT---CTCAACCTCCAGTGTGATGGT 11972 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || |||| ||||| || |||||||||||| Sbjct 11973 CTTTCCAGTTAGAGTTTTGACGAAGATCTGCATA 12006 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||| || || ||| || || || |||||||| ||||| Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||| || || ||||| |||||||||||||| || | || Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| || || | || | ||| | || ||||| || ||||| Sbjct 12355 ATACCCTCCTTGTCCTGAATCTT-GGTCTTGACGTTGTCGATAGTATCGCTAGACTCCAC 12413 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAA 33739 || | ||||| || ||||| || | || || |||| Sbjct 12414 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328687266603840