Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq464 105 4e-18
>seq464
Length=17248
Score = 105 bits (116), Expect = 4e-18
Identities = 154/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| ||||||||||| || || || |||||||| |||||||| ||||| | || ||
Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| ||||| || || || || | ||||||||| ||| | || | ||| || ||||| |
Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGA 11916
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGT 33716
|| || ||| | |||| ||| | ||||| ||| || || || | ||||| ||
Sbjct 11917 ATCTT-TGTCTTGACATTGTCGATTGTGTCAGAGCT---CTCAACCTCCAGTGTGATGGT 11972
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || |||| ||||| || ||||||||||||
Sbjct 11973 CTTTCCAGTTAGAGTTTTGACGAAGATCTGCATA 12006
Score = 93.3 bits (102), Expect = 3e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||| || || ||| || || || |||||||| |||||
Sbjct 12235 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 12294
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||| || || ||||| |||||||||||||| || | ||
Sbjct 12295 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 12354
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || ||||| ||| || || | || | ||| | || ||||| || |||||
Sbjct 12355 ATACCCTCCTTGTCCTGAATCTT-GGTCTTGACGTTGTCGATAGTATCGCTAGACTCCAC 12413
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAA 33739
|| | ||||| || ||||| || | || || ||||
Sbjct 12414 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328687266603840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |