Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq60 149 9e-30
seq127 100 4e-15
>seq60
Length=71262
Score = 149 bits (164), Expect = 9e-30
Identities = 218/303 (72%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| | |||| |||||||||| || ||||| ||||| || |||| |
Sbjct 41803 GATCTGGCAAATGTACAAGAAAG-CCGAGGCCTCTTTCTGGACTGCCGAAGAAATCGATC 41861
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| ||| | | |||||||||||| |||
Sbjct 41862 TTTCCAAAGATCTCCACG----ACTGGAACAACCGCCTCAACGACGACGAGCGTTTCTTC 41917
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| | ||||| ||||||||| ||||| ||| || || || ||||||||||
Sbjct 41918 ATCTCCCGTGTCCTTGCCTTTTTT-GCCGCTTCCGACGGTATTGTCAACGAGAACCTGCT 41976
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| ||||||| ||||| || | || || || |||| || ||||| ||||||||
Sbjct 41977 CGAGCGCTTTAGCGGTGAGGTGCAGGTTCCTGAAGCTCGTTGCTTCTACGGATTCCAGAT 42036
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct 42037 TATGATTGAGAACATCCACGCTGAAACCTACTCGCTCCTGATCGATACCTACATCAAGGA 42096
Query 1456068 CCC 1456070
||
Sbjct 42097 GCC 42099
Score = 111 bits (122), Expect = 2e-18
Identities = 183/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| | ||||| || | || ||||| ||||| | | ||| | ||||| ||
Sbjct 42472 ATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCT 42531
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
||| ||||||||||| ||| || ||||||||||| |||||| || || |||||||| |
Sbjct 42532 CTCCTCGGCATGAACTCCA-ATCTGATGTGCCAGTATATTGAA-TTCGTTGCCGACCGTC 42589
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || | || |||||| | ||||| ||| | | ||||||| ||| | |||
Sbjct 42590 TACTGGTCGCTCTCGGCAAC-AAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATG 42648
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||| || | |||||||||||||| || ||| || || || || |||
Sbjct 42649 GAGTCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAG 42708
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| || | ||||
Sbjct 42709 AAGGCCGGTGTTATGGCCA 42727
>seq127
Length=50345
Score = 100 bits (110), Expect = 4e-15
Identities = 202/300 (67%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|||||| | |||||| ||| ||| ||||| || | ||||| || || |||||
Sbjct 26811 ACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCACTCTGTTCAATGCT 26752
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
|| || || | || ||| | || ||||| || | |||||||||| || ||
Sbjct 26751 GGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGAAGGAGGACAGCATT 26692
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
||||||||||| ||||| || ||| ||| || | || |||||| | ||||| || ||
Sbjct 26691 GAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGACTGCCGGTGGTATT 26632
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | || || | || ||| | || | ||| | | || ||||| |||
Sbjct 26631 GGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTTACATTGGCGGTACCAATGGCTCA 26572
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||||| || |||| |||||||| ||||| || || |||| || | ||||| ||||||
Sbjct 26571 TCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTAGATACGTTGACCAG 26512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177408320672674
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |