Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq60 149 9e-30 seq127 100 4e-15 >seq60 Length=71262 Score = 149 bits (164), Expect = 9e-30 Identities = 218/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| |||||||||| || ||||| ||||| || |||| | Sbjct 41803 GATCTGGCAAATGTACAAGAAAG-CCGAGGCCTCTTTCTGGACTGCCGAAGAAATCGATC 41861 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| | | |||||||||||| ||| Sbjct 41862 TTTCCAAAGATCTCCACG----ACTGGAACAACCGCCTCAACGACGACGAGCGTTTCTTC 41917 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| | ||||| ||||||||| ||||| ||| || || || |||||||||| Sbjct 41918 ATCTCCCGTGTCCTTGCCTTTTTT-GCCGCTTCCGACGGTATTGTCAACGAGAACCTGCT 41976 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || ||||||| ||||| || | || || || |||| || ||||| |||||||| Sbjct 41977 CGAGCGCTTTAGCGGTGAGGTGCAGGTTCCTGAAGCTCGTTGCTTCTACGGATTCCAGAT 42036 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||| ||||||||||||||||||||||||| |||||| ||||||| Sbjct 42037 TATGATTGAGAACATCCACGCTGAAACCTACTCGCTCCTGATCGATACCTACATCAAGGA 42096 Query 1456068 CCC 1456070 || Sbjct 42097 GCC 42099 Score = 111 bits (122), Expect = 2e-18 Identities = 183/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| | ||||| || | || ||||| ||||| | | ||| | ||||| || Sbjct 42472 ATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCT 42531 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| ||||||||||| ||| || ||||||||||| |||||| || || |||||||| | Sbjct 42532 CTCCTCGGCATGAACTCCA-ATCTGATGTGCCAGTATATTGAA-TTCGTTGCCGACCGTC 42589 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| | ||||| ||| | | ||||||| ||| | ||| Sbjct 42590 TACTGGTCGCTCTCGGCAAC-AAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATG 42648 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| || ||| || || || || ||| Sbjct 42649 GAGTCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAG 42708 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 |||||||| || | |||| Sbjct 42709 AAGGCCGGTGTTATGGCCA 42727 >seq127 Length=50345 Score = 100 bits (110), Expect = 4e-15 Identities = 202/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942 |||||| | |||||| ||| ||| ||||| || | ||||| || || ||||| Sbjct 26811 ACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCACTCTGTTCAATGCT 26752 Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002 || || || | || ||| | || ||||| || | |||||||||| || || Sbjct 26751 GGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGAAGGAGGACAGCATT 26692 Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062 ||||||||||| ||||| || ||| ||| || | || |||||| | ||||| || || Sbjct 26691 GAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGACTGCCGGTGGTATT 26632 Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122 ||| | || || | || ||| | || | ||| | | || ||||| ||| Sbjct 26631 GGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTTACATTGGCGGTACCAATGGCTCA 26572 Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||||| || |||| |||||||| ||||| || || |||| || | ||||| |||||| Sbjct 26571 TCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTAGATACGTTGACCAG 26512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177408320672674