Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq127 116 5e-21
seq60 96.9 4e-15
>seq127
Length=50345
Score = 116 bits (128), Expect = 5e-21
Identities = 366/560 (65%), Gaps = 14/560 (3%)
Strand=Plus/Plus
Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926
|||||||||||| |||| || | || ||||| | || ||||| || |||||||||||
Sbjct 25609 TCCCACATGTCATACTGGAGAATACCCTGGGAAACTGGGGAACCTTCGTAGGTTTCATAG 25668
Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 110986
| || | | | ||||| ||| | || || | |||| || ||||||||
Sbjct 25669 GTGCCATATTCCTTGGCCAAGTCAGACGAAGCAGTCAAAGCACCGTGGTAGATGGTTTCG 25728
Query 110987 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AAT 111045
|| || | | ||| | || ||| || ||| | ||||| || | | || ||| ||
Sbjct 25729 AAAATTTGGGTATTGAGCTGCTTAGCCTCAGCAGAATCGAAAG-GCAGACGCAAGGCAAG 25787
Query 111046 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 111105
||| |||| || ||||| | |||||| | |||| || | ||| ||||| || |||
Sbjct 25788 GAATGCATCGGCCAGACCGTTAACACCGAGGGCAATTGGACGGTGACGCATGTTGCTCTT 25847
Query 111106 TCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGG 111161
| || ||| ||| || || | || | ||||||| || | | || || |
Sbjct 25848 ---CTTAGCCTCGGGAACAGGGTAGTAGTTGATATCAATGATCTTGTTCAAG---TTGCG 25901
Query 111162 TAACAATCTTTGT--GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219
| ||| || || |||||| | | | | | ||| | || | | |||
Sbjct 25902 AACCAAGACCTGCACGACTTCATGCAATCTACCGAAGTCATACTCGCCACGGGCAGCATC 25961
Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279
||| | | ||||| || | || |||| ||||| ||||| |||||| | | |
Sbjct 25962 AACAAAGGTAGGAAGCGCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACT 26021
Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339
||| || | ||| || || || | |||||| || || || |||| |||||| |||||
Sbjct 26022 GTATTCAATAATCTCAGTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTT 26081
Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
|||||||||||| || |||||||| || |||||| |||| | || || || ||||| |
Sbjct 26082 ACTCTTCTTGTTACAAGCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGC 26141
Query 111400 TTTGAGAATAGCCTTCCAAA 111419
| |||||||| | |||||
Sbjct 26142 CTCCAGAATAGCATACCAAA 26161
>seq60
Length=71262
Score = 96.9 bits (106), Expect = 4e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| ||||||||||| ||||| || || || || |||||| |||||
Sbjct 42417 GGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 42358
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||| || || |||||||||| ||| | || | | || || || ||||| |||||
Sbjct 42357 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGAT 42298
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|||||| ||| || || || | || |||| ||| ||||
Sbjct 42297 ACCCTCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627999208879200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |