Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq127 116 5e-21 seq60 96.9 4e-15 >seq127 Length=50345 Score = 116 bits (128), Expect = 5e-21 Identities = 366/560 (65%), Gaps = 14/560 (3%) Strand=Plus/Plus Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926 |||||||||||| |||| || | || ||||| | || ||||| || ||||||||||| Sbjct 25609 TCCCACATGTCATACTGGAGAATACCCTGGGAAACTGGGGAACCTTCGTAGGTTTCATAG 25668 Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 110986 | || | | | ||||| ||| | || || | |||| || |||||||| Sbjct 25669 GTGCCATATTCCTTGGCCAAGTCAGACGAAGCAGTCAAAGCACCGTGGTAGATGGTTTCG 25728 Query 110987 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AAT 111045 || || | | ||| | || ||| || ||| | ||||| || | | || ||| || Sbjct 25729 AAAATTTGGGTATTGAGCTGCTTAGCCTCAGCAGAATCGAAAG-GCAGACGCAAGGCAAG 25787 Query 111046 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 111105 ||| |||| || ||||| | |||||| | |||| || | ||| ||||| || ||| Sbjct 25788 GAATGCATCGGCCAGACCGTTAACACCGAGGGCAATTGGACGGTGACGCATGTTGCTCTT 25847 Query 111106 TCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGG 111161 | || ||| ||| || || | || | ||||||| || | | || || | Sbjct 25848 ---CTTAGCCTCGGGAACAGGGTAGTAGTTGATATCAATGATCTTGTTCAAG---TTGCG 25901 Query 111162 TAACAATCTTTGT--GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219 | ||| || || |||||| | | | | | ||| | || | | ||| Sbjct 25902 AACCAAGACCTGCACGACTTCATGCAATCTACCGAAGTCATACTCGCCACGGGCAGCATC 25961 Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 ||| | | ||||| || | || |||| ||||| ||||| |||||| | | | Sbjct 25962 AACAAAGGTAGGAAGCGCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACT 26021 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 ||| || | ||| || || || | |||||| || || || |||| |||||| ||||| Sbjct 26022 GTATTCAATAATCTCAGTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTT 26081 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 |||||||||||| || |||||||| || |||||| |||| | || || || ||||| | Sbjct 26082 ACTCTTCTTGTTACAAGCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGC 26141 Query 111400 TTTGAGAATAGCCTTCCAAA 111419 | |||||||| | ||||| Sbjct 26142 CTCCAGAATAGCATACCAAA 26161 >seq60 Length=71262 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| ||||||||||| ||||| || || || || |||||| ||||| Sbjct 42417 GGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 42358 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || |||||||||| ||| | || | | || || || ||||| ||||| Sbjct 42357 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGAT 42298 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 |||||| ||| || || || | || |||| ||| |||| Sbjct 42297 ACCCTCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627999208879200