Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq60 156 5e-33 seq127 136 5e-27 >seq60 Length=71262 Score = 156 bits (172), Expect = 5e-33 Identities = 310/457 (68%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || |||||||| |||||||| ||||| || | | | |||| |||||| Sbjct 42704 TAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATG 42645 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGC-ACTCCAATCTGTTTGAGG 129841 ||||| || ||||| | |||| | | ||| || | | | | | || Sbjct 42644 AAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT------ 42591 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | ||| | ||||| |||| ||||| | ||||||||| |||| ||| Sbjct 42590 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 42531 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 ||| || || || || | |||| ||||||||||| | ||||| || | |||| Sbjct 42530 GCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATG 42471 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 | | || || | ||| ||| | | ||| | || ||| || |||| Sbjct 42470 TCCTCAACCACCTTCTTGCTAGGGCGGTTGTTGAGGTGAGA---GAACAGCAAGCAGGCA 42414 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| |||||||| |||||||||||||| || || |||||| ||||| ||| Sbjct 42413 AAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGC 42354 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| |||| ||| ||||||||||| ||||| ||| Sbjct 42353 ATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCC 42294 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||| ||||| || | |||||| | ||||||| Sbjct 42293 TCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257 >seq127 Length=50345 Score = 136 bits (150), Expect = 5e-27 Identities = 412/629 (66%), Gaps = 13/629 (2%) Strand=Plus/Plus Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996 ||||||| ||| || || || ||||| || || | | || | | || || |||| Sbjct 26254 GTACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTC 26313 Query 118997 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056 ||||||||||| | ||| | ||| ||||||||||||||||||| || || || Sbjct 26314 GCTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGG 26373 Query 119057 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 119116 ||||||| || |||| | ||| ||| | ||||||| | || || || ||| Sbjct 26374 AGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACG 26433 Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176 | ||||| || || | || ||| | |||||| || ||||| || | || | || | | Sbjct 26434 GAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CAC 26492 Query 119177 CTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 || |||| ||| |||||| || || || |||||| || || || || || Sbjct 26493 CT--GGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAG 26550 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290 ||| |||| || |||| |||| |||||| || || | ||| ||| |||| | Sbjct 26551 CATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCAC- 26609 Query 119291 GACATCG-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 119349 || || |||| || | ||||||||| || || ||| || || || ||| | Sbjct 26610 GAATGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCT 26669 Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409 | || || ||||||| || || || ||| |||| | | | | ||||||| | Sbjct 26670 TCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATG 26729 Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469 || |||||| ||| |||||||| ||||| ||||| || | || || |||| ||| Sbjct 26730 CCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAA-GTAC 26788 Query 119470 CT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 119528 | |||||||| || |||||| || | | | |||||| | |||||||| || Sbjct 26789 TTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTCCA 26848 Query 119529 ATCGAGACCCGCATAAACATGTATTGGGG 119557 | | || ||||| | | || |||||| Sbjct 26849 ACGGCAACACGCATCAGGAGGTGTTGGGG 26877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618402909952120