Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq60 156 5e-33
seq127 136 5e-27
>seq60
Length=71262
Score = 156 bits (172), Expect = 5e-33
Identities = 310/457 (68%), Gaps = 18/457 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || || || |||||||| |||||||| ||||| || | | | |||| ||||||
Sbjct 42704 TAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATG 42645
Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGC-ACTCCAATCTGTTTGAGG 129841
||||| || ||||| | |||| | | ||| || | | | | | ||
Sbjct 42644 AAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT------ 42591
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
||||| || | ||| | ||||| |||| ||||| | ||||||||| |||| |||
Sbjct 42590 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 42531
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
||| || || || || | |||| ||||||||||| | ||||| || | ||||
Sbjct 42530 GCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATG 42471
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018
| | || || | ||| ||| | | ||| | || ||| || ||||
Sbjct 42470 TCCTCAACCACCTTCTTGCTAGGGCGGTTGTTGAGGTGAGA---GAACAGCAAGCAGGCA 42414
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || ||| |||||||| |||||||||||||| || || |||||| ||||| |||
Sbjct 42413 AAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGC 42354
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|| || || |||||||||| |||||| |||| ||| ||||||||||| ||||| |||
Sbjct 42353 ATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCC 42294
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|| ||| ||||| || | |||||| | |||||||
Sbjct 42293 TCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 42257
>seq127
Length=50345
Score = 136 bits (150), Expect = 5e-27
Identities = 412/629 (66%), Gaps = 13/629 (2%)
Strand=Plus/Plus
Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996
||||||| ||| || || || ||||| || || | | || | | || || ||||
Sbjct 26254 GTACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTC 26313
Query 118997 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056
||||||||||| | ||| | ||| ||||||||||||||||||| || || ||
Sbjct 26314 GCTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGG 26373
Query 119057 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 119116
||||||| || |||| | ||| ||| | ||||||| | || || || |||
Sbjct 26374 AGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACG 26433
Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176
| ||||| || || | || ||| | |||||| || ||||| || | || | || | |
Sbjct 26434 GAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CAC 26492
Query 119177 CTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230
|| |||| ||| |||||| || || || |||||| || || || || ||
Sbjct 26493 CT--GGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAG 26550
Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290
||| |||| || |||| |||| |||||| || || | ||| ||| |||| |
Sbjct 26551 CATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCAC- 26609
Query 119291 GACATCG-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 119349
|| || |||| || | ||||||||| || || ||| || || || ||| |
Sbjct 26610 GAATGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCT 26669
Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409
| || || ||||||| || || || ||| |||| | | | | ||||||| |
Sbjct 26670 TCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATG 26729
Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469
|| |||||| ||| |||||||| ||||| ||||| || | || || |||| |||
Sbjct 26730 CCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAA-GTAC 26788
Query 119470 CT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 119528
| |||||||| || |||||| || | | | |||||| | |||||||| ||
Sbjct 26789 TTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTCCA 26848
Query 119529 ATCGAGACCCGCATAAACATGTATTGGGG 119557
| | || ||||| | | || ||||||
Sbjct 26849 ACGGCAACACGCATCAGGAGGTGTTGGGG 26877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618402909952120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |