Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq416 268 3e-66
seq464 147 7e-30
seq312 109 2e-18
>seq416
Length=20535
Score = 268 bits (296), Expect = 3e-66
Identities = 634/950 (67%), Gaps = 21/950 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | || || ||| | |||||||| || || || || | ||| | | |||| ||
Sbjct 6331 GCTGTTGGTATTGATCTGGGTACTACCTACTCCTGCGTGGGTGTCTTCCGTGATGACCGC 6272
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| ||||| || || ||||| || |||||| | || || || || | ||| || || |||
Sbjct 6271 ATCGAAATCATCGCCAATGACCAGGGTAACCGTACCACCCCCTCGTTCGTGGCCTTCACC 6212
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| ||||||||| | || |||||| | || || || || | ||| || || | ||
Sbjct 6211 GACACTGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTTGCCATGAACCCTCACAAC 6152
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTT------TTCTGACAAATCTACA 349432
|| || || ||||||||||| ||||| ||| | |||| | |||| ||
Sbjct 6151 ACCGTCTTCGATGCTAAGCGTCTTATCGGTCGTCGTTTCCAGGATGCTGAGG--TC---- 6098
Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492
|| ||||| | || || | || || | || || | | ||| |||| || || ||
Sbjct 6097 CAGGCTGATATGAAGCACTGGCCCTTCAAGGTCGT-CGACAAG--GGTGGCAAGCCCATC 6041
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
|||||||| || | || ||||| || || || || || ||| | || || |||
Sbjct 6040 ATTGAGGTCGAGTTCAAGGGTGAGGCCAAGCAGTTCACTCCTGAGGAAGTCTCCTCTATG 5981
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
|| | || ||| || | |||||| | || | |||| || || | | |||
Sbjct 5980 GTCCTGACCAAGATGCGTGAGACTGCTGAGTCCTACCTTGGTGGCACCGTCAACAACGCT 5921
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
|| || ||||| || ||||| || || || | |||||| || || || ||||||||
Sbjct 5920 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTGGT 5861
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
|||||| || | || ||||| | || || || || |||||||| || || |||||
Sbjct 5860 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCC 5801
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || || || || | | || || ||| | || || || ||| | ||||||
Sbjct 5800 TACGGTCTGGACAAGAAGGTCGAGGGTGAGCGTAATGTCCTCATCTTCGATCTTGGTGGT 5741
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
||||| |||||||| || || || || |||| ||||| || || || || || || |||
Sbjct 5740 GGTACCTTTGATGTCTCTCTCCTGACTATTGAGGAGGGTATCTTCGAGGTCAAGGCTACT 5681
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912
||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct 5680 GCTGGTGATACTCACCTTGGTGGTGAGGATTTCGACAACCGTCTCGTCAACCACTTTGTC 5621
Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGT 349969
|| || || ||||| ||||| || | || | || | || | | || | |||
Sbjct 5620 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCT--GACCTCCAACGCCCGTGCTCTCCGT 5564
Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029
|| || | ||||| || || ||||||||||| || | || ||| || | || |||||
Sbjct 5563 CGTCTCCGCACTGCTTGCGAGCGTGCTAAGCGCACCCTGTCCTCTGCTGCTCAGACCTCC 5504
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
||||| || || ||||| || || | ||||||| | || || || ||||||||
Sbjct 5503 ATTGAGATCGACTCTCTCTTCGAGGGTATTGATTTCTACACCTCCATCACCCGTGCTCGT 5444
Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139
|| || ||| | || ||| || || | | || ||||| || || ||
Sbjct 5443 TTCGAGGAACTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGA 5394
>seq464
Length=17248
Score = 147 bits (162), Expect = 7e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| ||||| ||||| |||||||| || || || ||
Sbjct 12003 CATACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTC 12062
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| |||||||| |||||||| ||||| ||||||||||| || ||
Sbjct 12063 CGACAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGG 12122
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || |||||||| || || || | || || || || || | || || ||
Sbjct 12123 TGGGATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTC 12182
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| | |||||||| || || || || || || ||||||||
Sbjct 12183 GACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 134 bits (148), Expect = 4e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || || || ||||| || || || || || || || ||
Sbjct 11779 CCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAG 11838
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || ||||||||||| || ||||| ||||| ||||| ||||| ||||| || || |||
Sbjct 11839 AGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGA 11898
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| || || || |||||||| || | || ||||| || || | ||||| |||||
Sbjct 11899 ATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACC 11958
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| | |||||||| ||||| ||||| || || ||||||||
Sbjct 11959 TCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 102 bits (112), Expect = 2e-16
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | ||||| || ||||| || || || || || || || || ||
Sbjct 12231 CATCCCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 12290
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || ||||| || ||||||||||| | ||| ||||| |||||
Sbjct 12291 GGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGG 12350
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || |||||||| || | || || || || || | ||| | ||
Sbjct 12351 GGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTC 12410
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727
|| || || || | ||||| || || || || || ||||
Sbjct 12411 CACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451
Score = 95.1 bits (104), Expect = 4e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || || || || ||||| ||||| |||||||| || || ||
Sbjct 12543 CATTCCACCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTC 12602
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || ||||| || || || || || ||||| || || ||||| |||||
Sbjct 12603 GGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGG 12662
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || | || || || || || | || | ||
Sbjct 12663 GGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTC 12722
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| ||||| || | |||||||||||
Sbjct 12723 CACCTCAAGGGTGATGGTCTTTCCGGT 12749
>seq312
Length=28460
Score = 109 bits (120), Expect = 2e-18
Identities = 108/139 (78%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || |||||| | ||||| ||| || || | |||||||||||||||||||| ||
Sbjct 6152 CGAGGGACACCAAGGGTAACGTTC---TTTGAGGAGACACCAGCAAAGTGGAAAGTGTTC 6096
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||||| |||||||||||| ||||| || |||| ||| |||||||| ||
Sbjct 6095 AGCGTCATCTGAGTAGCGGGCTCACCAATGGACTGGGCGGCAAGAACACCAACCATCTCA 6036
Query 377578 CCAGGATTGACAATAGCCT 377596
||||| || || |||||
Sbjct 6035 CCAGGGTTCGCACCAGCCT 6017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515173306899131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |