Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq416 268 3e-66 seq464 147 7e-30 seq312 109 2e-18 >seq416 Length=20535 Score = 268 bits (296), Expect = 3e-66 Identities = 634/950 (67%), Gaps = 21/950 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||| | |||||||| || || || || | ||| | | |||| || Sbjct 6331 GCTGTTGGTATTGATCTGGGTACTACCTACTCCTGCGTGGGTGTCTTCCGTGATGACCGC 6272 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| || || ||||| || |||||| | || || || || | ||| || || ||| Sbjct 6271 ATCGAAATCATCGCCAATGACCAGGGTAACCGTACCACCCCCTCGTTCGTGGCCTTCACC 6212 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| | || |||||| | || || || || | ||| || || | || Sbjct 6211 GACACTGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTTGCCATGAACCCTCACAAC 6152 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTT------TTCTGACAAATCTACA 349432 || || || ||||||||||| ||||| ||| | |||| | |||| || Sbjct 6151 ACCGTCTTCGATGCTAAGCGTCTTATCGGTCGTCGTTTCCAGGATGCTGAGG--TC---- 6098 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| | || || | || || | || || | | ||| |||| || || || Sbjct 6097 CAGGCTGATATGAAGCACTGGCCCTTCAAGGTCGT-CGACAAG--GGTGGCAAGCCCATC 6041 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 |||||||| || | || ||||| || || || || || ||| | || || ||| Sbjct 6040 ATTGAGGTCGAGTTCAAGGGTGAGGCCAAGCAGTTCACTCCTGAGGAAGTCTCCTCTATG 5981 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | || ||| || | |||||| | || | |||| || || | | ||| Sbjct 5980 GTCCTGACCAAGATGCGTGAGACTGCTGAGTCCTACCTTGGTGGCACCGTCAACAACGCT 5921 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 5920 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTGGT 5861 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || |||||||| || || ||||| Sbjct 5860 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCC 5801 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || ||| | || || || ||| | |||||| Sbjct 5800 TACGGTCTGGACAAGAAGGTCGAGGGTGAGCGTAATGTCCTCATCTTCGATCTTGGTGGT 5741 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| |||||||| || || || || |||| ||||| || || || || || || ||| Sbjct 5740 GGTACCTTTGATGTCTCTCTCCTGACTATTGAGGAGGGTATCTTCGAGGTCAAGGCTACT 5681 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 ||||||||||| || |||||||| || ||||| || || |||||||| || ||||| Sbjct 5680 GCTGGTGATACTCACCTTGGTGGTGAGGATTTCGACAACCGTCTCGTCAACCACTTTGTC 5621 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGT 349969 || || || ||||| ||||| || | || | || | || | | || | ||| Sbjct 5620 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCT--GACCTCCAACGCCCGTGCTCTCCGT 5564 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | ||||| || || ||||||||||| || | || ||| || | || ||||| Sbjct 5563 CGTCTCCGCACTGCTTGCGAGCGTGCTAAGCGCACCCTGTCCTCTGCTGCTCAGACCTCC 5504 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| || || ||||| || || | ||||||| | || || || |||||||| Sbjct 5503 ATTGAGATCGACTCTCTCTTCGAGGGTATTGATTTCTACACCTCCATCACCCGTGCTCGT 5444 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139 || || ||| | || ||| || || | | || ||||| || || || Sbjct 5443 TTCGAGGAACTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGA 5394 >seq464 Length=17248 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| ||||| ||||| |||||||| || || || || Sbjct 12003 CATACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTC 12062 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| |||||||| ||||| ||||||||||| || || Sbjct 12063 CGACAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGG 12122 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || |||||||| || || || | || || || || || | || || || Sbjct 12123 TGGGATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTC 12182 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| | |||||||| || || || || || || |||||||| Sbjct 12183 GACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 134 bits (148), Expect = 4e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || || || ||||| || || || || || || || || Sbjct 11779 CCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAG 11838 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || ||||||||||| || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct 11839 AGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGA 11898 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || || |||||||| || | || ||||| || || | ||||| ||||| Sbjct 11899 ATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACC 11958 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | |||||||| ||||| ||||| || || |||||||| Sbjct 11959 TCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| || ||||| || || || || || || || || || Sbjct 12231 CATCCCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 12290 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || ||||| || ||||||||||| | ||| ||||| ||||| Sbjct 12291 GGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGG 12350 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | || || || || || | ||| | || Sbjct 12351 GGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTC 12410 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 || || || || | ||||| || || || || || |||| Sbjct 12411 CACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 12451 Score = 95.1 bits (104), Expect = 4e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || || ||||| ||||| |||||||| || || || Sbjct 12543 CATTCCACCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTC 12602 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| || || || || || ||||| || || ||||| ||||| Sbjct 12603 GGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGG 12662 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || || | || | || Sbjct 12663 GGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTC 12722 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 || ||||| || | ||||||||||| Sbjct 12723 CACCTCAAGGGTGATGGTCTTTCCGGT 12749 >seq312 Length=28460 Score = 109 bits (120), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | ||||| ||| || || | |||||||||||||||||||| || Sbjct 6152 CGAGGGACACCAAGGGTAACGTTC---TTTGAGGAGACACCAGCAAAGTGGAAAGTGTTC 6096 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||||| |||||||||||| ||||| || |||| ||| |||||||| || Sbjct 6095 AGCGTCATCTGAGTAGCGGGCTCACCAATGGACTGGGCGGCAAGAACACCAACCATCTCA 6036 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || ||||| Sbjct 6035 CCAGGGTTCGCACCAGCCT 6017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515173306899131