Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq127 176 5e-39
>seq127
Length=50345
Score = 176 bits (194), Expect = 5e-39
Identities = 374/549 (68%), Gaps = 12/549 (2%)
Strand=Plus/Minus
Query 53239 CCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298
|| ||| || ||| || | ||| ||| |||||||| || || || | || || |||||
Sbjct 26818 CCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCACTCTGTT 26759
Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGA 53358
||| |||||||| || |||||| || | ||||||| |||| | |||||||| ||
Sbjct 26758 CAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGAAGGAGGA 26699
Query 53359 CTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGG 53418
| || || ||||||||||| || || ||| |||||| || |||||| | ||
Sbjct 26698 CAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGACTGCCGG 26639
Query 53419 TGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACG 53476
|||||| ||| || || | ||| | | ||||| | || | || || ||
Sbjct 26638 TGGTATTGGTCTCAACGTCCATCG--CATTCGTGCCACAGGTTCTTACATTGGCGGTACC 26581
Query 53477 AACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTAC 53536
|| ||| || ||||||| || || ||||| ||||| ||||| ||||| || | |||
Sbjct 26580 AATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTAGATAC 26521
Query 53537 GTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595
|| |||||||||| ||||| | ||| | | || ||||| || || ||||| |||||
Sbjct 26520 GTTGACCAGGGTGGAAACAAGCGTCCAGGTG-CATTTGCCATTTATCTGGAGCCTTGGCA 26462
Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGC 53653
| |||| | | ||||| | || || ||| ||| || || | ||||| | | ||
Sbjct 26461 CTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGAAGTCAGAGC 26402
Query 53654 TGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAA 53712
| ||||| |||| ||| ||||| |||| ||| || || |||||| | ||| |||
Sbjct 26401 T--CGTGATTTGTTCTAC-GCTCTCTGGACTCCTGATCTGTTCATGAAGCGGGTTGAGGC 26345
Query 53713 GGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGG 53772
||| || ||| ||| | ||||| | |||| ||| ||| | | |||||||||
Sbjct 26344 CAACGGTGACTGGACCCTCTTCTGCCCTAGCGAGGCCCCTGGCTTGGCTGATGTCTACGG 26285
Query 53773 TGAGGAGTT 53781
|| |||||
Sbjct 26284 CGACGAGTT 26276
Score = 89.7 bits (98), Expect = 6e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||| | ||| ||| |||||||||||| | ||| | | | || ||| ||
Sbjct 25297 TCAAGGCTCTATACAAGACCGTGTGGGAGATTTCCCAGCGCCGGATCCTGGAGATGGCTG 25238
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
|||| |||||||| | ||| |||||||||||||| || || ||| || || | ||
Sbjct 25237 CTGACCGTGGTGCCTTCATTGACCAGTCCCAGTCGCTCAATATCCATCTGAAGGAGCCCA 25178
Query 55848 CACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| |||| | | || | |||||||| || ||||||| ||| | ||||| ||
Sbjct 25177 CCATGGGCAAGCTTA-CTAGCATGCACTTCGCTGGCTGGAAGATGGGTTTAAAGACCGGC 25119
Query 55907 ATGTACTATCTGCGGACC 55924
|||||||| ||||| |||
Sbjct 25118 ATGTACTACCTGCGTACC 25101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547187428484600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |