Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq464 176 5e-39 seq60 149 7e-31 seq81 129 7e-25 seq127 105 8e-18 seq98 98.7 1e-15 seq4161 93.3 5e-14 >seq464 Length=17248 Score = 176 bits (194), Expect = 5e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||||||||| || || || |||||||| || || ||||| ||||| | |||| || | Sbjct 12451 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 12392 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 || | ||| | || ||||||||||||||||| || || || |||||||||||| | | Sbjct 12391 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 12332 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | ||||||||||||||||| ||||||| || || || | ||||| || |||| |||| Sbjct 12331 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 12272 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| || || ||||||| || ||||| Sbjct 12271 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 12235 Score = 159 bits (176), Expect = 4e-34 Identities = 184/247 (74%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| || || || ||||||||| | Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||||||||||||||| ||||| ||||||||| Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 11886 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || |||||||| || || || |||| || || || | ||||| || Sbjct 11885 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 11826 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| |||||| |||||| || || ||| | || || || |||||| | ||| || Sbjct 11825 ATCCAGAAGGAAAGCACTCTACACCTGGTCCTTCGCCTCCGTGGTGGAAA---CTAATGT 11769 Query 27646 TTTTCCT 27652 ||||||| Sbjct 11768 TTTTCCT 11762 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || || ||||| ||| || | Sbjct 12233 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAG--AGCT 12176 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || || || || || ||||| || || ||||||| Sbjct 12175 CCGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACC 12116 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || || ||||| |||||||| ||||||| |||||| || | ||||| | Sbjct 12115 AGCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACA 12056 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||| ||||| || ||||| || || | ||||| || ||||| Sbjct 12055 ACATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGG 12007 Score = 129 bits (142), Expect = 7e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| ||||| | || | || | || | ||| | Sbjct 12749 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGACACTATCGACAACGTCAAGACC 12690 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || || || ||||||||||| || || || || || ||| Sbjct 12689 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCAGGCAAG 12630 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | ||||| || | ||||| || | |||||||| || ||||| || Sbjct 12629 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTCTCCAC 12570 Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||| | |||||||| |||||| Sbjct 12569 CTGGTCCTCCGTCTTCGTGGTGGA 12546 >seq60 Length=71262 Score = 149 bits (164), Expect = 7e-31 Identities = 340/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Plus Query 64658 TTACTAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTC 64714 |||| || |||||| ||||||| || ||||||| | ||| | || | |||| | Sbjct 42206 TTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCTACCTTTGCCC 42265 Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774 | ||||||| |||||| || ||| || || || || || ||||| || || || | Sbjct 42266 AACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGA 42325 Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834 | |||||||| || ||||| ||||||||||| ||||| | || || |||||||| |||| Sbjct 42326 TCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCT 42385 Query 64835 CTCGGGACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGA 64892 | || || ||||| || ||| || ||||| | || |||||| |||||||| | Sbjct 42386 CCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTT--GCTGTTCTCTCACCTCAACAA 42443 Query 64893 CAAACC-ATCACATGGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGG 64951 | || | || || | | || || | | |||||| | ||||| |||| Sbjct 42444 CCGCCCTAGCAAGAAGGTGGTTGA-GGACATCATCATTGAGGCTGTTGCCATTGAGAAGG 42502 Query 64952 AATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAAC 65011 | ||| | || | || || || ||| |||| |||||||| | || || |||| | Sbjct 42503 AGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCC 42562 Query 65012 AGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGT-TTGGTATTAAGCCCTACTGG 65070 ||||||| ||||| || || || || || | | || | | || | ||| |||| Sbjct 42563 AGTATATTGAATTCGTTGCCGACCGTCTAC-TGGTCGCTCTCGGCAACAAGAAGTACTTC 42621 Query 65071 AATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTT 65130 ||| | | || || || || | |||||| | ||| ||| | || ||||| ||||| Sbjct 42622 AATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGACCAACTTC 42681 Query 65131 TTTGAAAAGAGGGTAGGTGATTAC 65154 ||||| ||| | || ||||||||| Sbjct 42682 TTTGAGAAGCGTGTGGGTGATTAC 42705 >seq81 Length=63167 Score = 129 bits (142), Expect = 7e-25 Identities = 141/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 62841 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 62900 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| |||||||||||||| || Sbjct 62901 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 62960 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 62961 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 63019 Query 27594 GGAAT 27598 || || Sbjct 63020 GGTAT 63024 >seq127 Length=50345 Score = 105 bits (116), Expect = 8e-18 Identities = 399/616 (65%), Gaps = 19/616 (3%) Strand=Plus/Plus Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 ||||| ||||| | ||||||| | | |||| | |||| | | | ||| |||| Sbjct 26255 TACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCG 26314 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 ||||||| | ||| |||||| || | ||| || ||||||||| ||||| Sbjct 26315 CTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGA 26374 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGC 81307 ||||||| ||| ||||| || || ||| | | || || | || ||||| | Sbjct 26375 GTCCAGAGAGCGTAGAACAAATCACG--AGCTCTGACTTCTTCCTTTCCGTGGTTCTTAC 26432 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 | | || | || || | || || | ||||| ||||||||||| | ||| | | | Sbjct 26433 GGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CA 26491 Query 81368 CCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 ||| | || | |||||||||| ||||| | ||||| || || || |||| | Sbjct 26492 CCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGC 26551 Query 81424 ATAGGGATGATACCATCTGACTGA-CCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 || || | || |||| || ||| || || ||||| | || || || |||| || Sbjct 26552 ATGGGAACAATTCCATTGGA-TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACG 26610 Query 81483 CACCTTGCTGATTGAA----AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACC 81538 | ||| ||| || ||||| || ||||| | ||| |||||| ||||||| Sbjct 26611 AA---TGC-GATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACG 26666 Query 81539 GGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGC 81598 |||| || || || || ||||| ||||| || | |||||||||| |||||| ||| Sbjct 26667 TCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGG 26726 Query 81599 TTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAAT 81658 || || |||||| | || ||||||||||| || |||| || || |||| | Sbjct 26727 ATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGT 26786 Query 81659 AACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATAC 81718 | | ||||| |||| |||||||| | | ||| || | |||||||| | Sbjct 26787 ACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTC 26846 Query 81719 CGATAGCTACACGCAT 81734 | | || |||||||| Sbjct 26847 CAACGGCAACACGCAT 26862 >seq98 Length=58949 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||||| || || || |||||||| |||||| Sbjct 33070 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAG 33011 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || || || || || | Sbjct 33010 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTC 32951 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 32950 CGCCTGCGTGGTGG 32937 >seq4161 Length=204 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || || |||||||| || ||||||||||||||| | Sbjct 11 AATGCAGATCTTCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAG 70 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 |||| ||| | || | ||| ||||| |||||||| || || ||||| |||| Sbjct 71 CGATACCATCGACAACGTTAAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCAG 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570280622668240