Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq464 114 8e-21 >seq464 Length=17248 Score = 114 bits (126), Expect = 8e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| || |||||||| ||||| || ||||| || || || || || ||| | ||||| Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||| || || || | |||||| ||||| || || | ||||||||||| || Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTG 11915 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||||| || || | |||||||| |||||| || |||| || || || || Sbjct 11916 AATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTT 11975 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||| ||||| || || |||||||| Sbjct 11976 TCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||| |||||||| ||||||||||||||| || || || Sbjct 12547 CCACCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAG 12606 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || || || || || | ||||| ||||| || || Sbjct 12607 AGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 12666 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTC 34655 | ||||||||||| |||| || || || ||| | || ||| ||||| ||| Sbjct 12667 ATGCCCTCCTTGTCCTGGATC-TTGGTCTTGACGTTGTCGATAGTG---TCGCTAGACTC 12722 Query 34656 CACTTCCACGGTTATCGTTTTACCGGT 34682 ||| || | ||| || || || ||||| Sbjct 12723 CACCTCAAGGGTGATGGTCTTTCCGGT 12749 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||| || || ||| ||||| || ||||| || || || || || || Sbjct 12244 AGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 12303 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || ||||| ||||| ||||| || |||||||| ||||| || || | |||||| Sbjct 12304 CCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCC 12363 Query 34609 TTGTC 34613 ||||| Sbjct 12364 TTGTC 12368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314713578001241