Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq464 114 8e-21
>seq464
Length=17248
Score = 114 bits (126), Expect = 8e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| || |||||||| ||||| || ||||| || || || || || ||| | |||||
Sbjct 11797 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 11856
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| |||||||| || || || | |||||| ||||| || || | ||||||||||| ||
Sbjct 11857 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTG 11915
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| ||||| || || | |||||||| |||||| || |||| || || || ||
Sbjct 11916 AATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTT 11975
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| |||| ||||| || || ||||||||
Sbjct 11976 TCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||| |||||||| ||||||||||||||| || || ||
Sbjct 12547 CCACCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAG 12606
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| || || || || || || || | ||||| ||||| || ||
Sbjct 12607 AGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 12666
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTC 34655
| ||||||||||| |||| || || || ||| | || ||| ||||| |||
Sbjct 12667 ATGCCCTCCTTGTCCTGGATC-TTGGTCTTGACGTTGTCGATAGTG---TCGCTAGACTC 12722
Query 34656 CACTTCCACGGTTATCGTTTTACCGGT 34682
||| || | ||| || || || |||||
Sbjct 12723 CACCTCAAGGGTGATGGTCTTTCCGGT 12749
Score = 82.4 bits (90), Expect = 5e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| || || ||| ||||| || ||||| || || || || || ||
Sbjct 12244 AGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 12303
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || ||||| ||||| ||||| || |||||||| ||||| || || | ||||||
Sbjct 12304 CCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCC 12363
Query 34609 TTGTC 34613
|||||
Sbjct 12364 TTGTC 12368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314713578001241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |