Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq372 107 2e-18
>seq372
Length=23634
Score = 107 bits (118), Expect = 2e-18
Identities = 198/281 (70%), Gaps = 12/281 (4%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGG-GGGTTCCC 34380
||| | ||||||||||||| ||||| || || || ||||| ||| ||| | |
Sbjct 12247 GGGATCAAGATCTGGGACGGCAACGGGAGCCGCGAGTTCCTGGATC-GCGTTGGGCTGGC 12305
Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
|||| ||||||||| ||||||| || ||||||||||||||| | || || |||||
Sbjct 12306 GCACCGGGCCGAGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCATTTCGGGGC 12365
Query 34441 GGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTG---CAGT 34496
|||||| || || ||| || | || || |||| | ||| | ||||||||| ||
Sbjct 12366 GGAGTA-CGTGGACGCGCAGACCGATTACACGGGCCTGGGCGTCGACCAGCTGGCCGAGG 12424
Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGAT-GACAGAAGGATCGTGATGTGCGCGTGG 34555
|||| || | || || | ||||| | | ||| | | ||| | ||| ||||||
Sbjct 12425 TCGTG--CGCAAGCTCAAA--GAAACCCCGTTCGACCGCCGCATCATCCTGTCGGCGTGG 12480
Query 34556 AACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCA 34596
|||||| |||||| | |||||||||||| ||||||||
Sbjct 12481 AACCCGGCGGATCTGGCGAAGATGGCGCTCCCGCCGTGCCA 12521
Score = 107 bits (118), Expect = 2e-18
Identities = 198/281 (70%), Gaps = 12/281 (4%)
Strand=Plus/Minus
Query 6749 TGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATC 6808
|||||||| |||||||||||| | |||||| |||||||||||| ||| | |||
Sbjct 12521 TGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGGGTTCCACGCCGACAGGATGATG 12462
Query 6809 CTTCTGTC-ATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTG---CAGCTGGTCCGC 6864
| | ||| | | ||||| | || || | || |||| || ||||||||| |
Sbjct 12461 CGGCGGTCGAACGGGGTTTC--TTTGAGCTTGCG--CACGACCTCGGCCAGCTGGTCGAC 12406
Query 6865 TCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACT 6923
||| | |||| || || | || ||| || || ||||||||||| || || | |||||
Sbjct 12405 GCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACG-TACTCCGCCCCGAAATGCCGCCACT 12347
Query 6924 GGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCC-CCGCTTGTCC 6982
|||||||||| || ||||||| ||||||||| |||| | | ||| ||| |||
Sbjct 12346 GGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGCCAGCCCAACGC-GATCC 12288
Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
|| || || || ||||| ||||||||||||| | |||
Sbjct 12287 AGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTTGATCCC 12247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448238995099440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |