Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq464 176 1e-38
seq81 122 2e-22
seq3826 91.5 3e-13
seq4161 86.0 1e-11
>seq464
Length=17248
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| || || |||||||||||||| || |||| || || | |||||
Sbjct 12022 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 12081
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || |||||||| || ||||| ||||| || || | || || || ||
Sbjct 12082 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 12141
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| |||
Sbjct 12142 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 12201
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | ||||||
Sbjct 12202 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| |||||| || || |||||||| || || | || || | ||||||
Sbjct 11794 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 11853
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| || || || ||||| || |||| || |||||||||
Sbjct 11854 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 11913
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| || || || ||||| ||||||||||| |||||||| || ||||| |||
Sbjct 11914 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 11973
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || ||||| || || || | ||||||
Sbjct 11974 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005
Score = 159 bits (176), Expect = 8e-34
Identities = 158/203 (78%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| ||||| ||||| ||||| ||||| || || | || ||
Sbjct 12552 ACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGT 12611
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || |||||||||||||||||||||||||| ||||| || |||||||| || | ||
Sbjct 12612 ACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCC 12671
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTC 211069
||||||||||||||||| || ||||| ||||| ||||| ||| || |||||
Sbjct 12672 CTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGA---CTCCACCTC 12728
Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092
|| ||||| |||||||| ||||
Sbjct 12729 AAGGGTGATGGTCTTTCCGGTGA 12751
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| ||||| || || |||||||| || || | || || | |||||
Sbjct 12250 AGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 12309
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| ||||| || || ||||| | || || |||||||| || | || |||||||||
Sbjct 12310 TCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 12369
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079
|| ||||| || ||||| ||||| || || ||| || |||||||| |||||
Sbjct 12370 TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGA---CTCCACCTCGAGGGTGATA 12426
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAA 211104
||||| || ||||| ||||| ||||
Sbjct 12427 GTCTTACCAGTGAGGGTCTTGACAA 12451
>seq81
Length=63167
Score = 122 bits (134), Expect = 2e-22
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || |||||||| || ||||||||
Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || ||||| |||
Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 62899 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843
Query 211104 AA 211105
||
Sbjct 62842 AA 62841
>seq3826
Length=299
Score = 91.5 bits (100), Expect = 3e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| ||||||||| || ||||| ||||| ||||| ||||||||||| || | ||||
Sbjct 299 TTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTG 240
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| ||||| || || | ||||||
Sbjct 239 ATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 202
>seq4161
Length=204
Score = 86.0 bits (94), Expect = 1e-11
Identities = 90/117 (77%), Gaps = 6/117 (5%)
Strand=Plus/Minus
Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061
|| |||| ||||| ||||||||||| || || ||||| |||||||| || ||||
Sbjct 124 GGGGGAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATC---GCTT 68
Query 211062 ---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|||||||| || ||||| |||||||| ||||| ||||| || || | |||||||
Sbjct 67 GACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159089964720605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |