Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq464 176 1e-38 seq81 122 2e-22 seq3826 91.5 3e-13 seq4161 86.0 1e-11 >seq464 Length=17248 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || || |||||||||||||| || |||| || || | ||||| Sbjct 12022 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 12081 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || |||||||| || ||||| ||||| || || | || || || || Sbjct 12082 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 12141 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 12142 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 12201 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || || | |||||| Sbjct 12202 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||| || || |||||||| || || | || || | |||||| Sbjct 11794 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 11853 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || |||||||| || || || ||||| || |||| || ||||||||| Sbjct 11854 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 11913 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || || || ||||| ||||||||||| |||||||| || ||||| ||| Sbjct 11914 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 11973 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| || || || | |||||| Sbjct 11974 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 159 bits (176), Expect = 8e-34 Identities = 158/203 (78%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| ||||| ||||| ||||| ||||| || || | || || Sbjct 12552 ACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGT 12611 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || |||||||||||||||||||||||||| ||||| || |||||||| || | || Sbjct 12612 ACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCC 12671 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTC 211069 ||||||||||||||||| || ||||| ||||| ||||| ||| || ||||| Sbjct 12672 CTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGA---CTCCACCTC 12728 Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092 || ||||| |||||||| |||| Sbjct 12729 AAGGGTGATGGTCTTTCCGGTGA 12751 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||||| || || |||||||| || || | || || | ||||| Sbjct 12250 AGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 12309 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || || ||||| | || || |||||||| || | || ||||||||| Sbjct 12310 TCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 12369 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||| || || ||| || |||||||| ||||| Sbjct 12370 TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGA---CTCCACCTCGAGGGTGATA 12426 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||| || ||||| ||||| |||| Sbjct 12427 GTCTTACCAGTGAGGGTCTTGACAA 12451 >seq81 Length=63167 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || ||||| || |||| || ||||||||||||||||| || ||||| ||| Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 62899 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843 Query 211104 AA 211105 || Sbjct 62842 AA 62841 >seq3826 Length=299 Score = 91.5 bits (100), Expect = 3e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||||||| || ||||| ||||| ||||| ||||||||||| || | |||| Sbjct 299 TTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTG 240 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| || || | |||||| Sbjct 239 ATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 202 >seq4161 Length=204 Score = 86.0 bits (94), Expect = 1e-11 Identities = 90/117 (77%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061 || |||| ||||| ||||||||||| || || ||||| |||||||| || |||| Sbjct 124 GGGGGAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATC---GCTT 68 Query 211062 ---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| || ||||| |||||||| ||||| ||||| || || | ||||||| Sbjct 67 GACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159089964720605