Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq464 152 1e-31 seq81 98.7 2e-15 seq1817 87.8 4e-12 seq4138 86.0 1e-11 >seq464 Length=17248 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||| ||| || |||| ||||| |||| | || | ||||||| Sbjct 11794 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 11853 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||||||| || ||||||||||| || || || ||||| || |||||||| |||||||| Sbjct 11854 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 11913 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| ||| ||||| ||||| ||| | || || || | ||||| ||| Sbjct 11914 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 11973 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | |||||| | ||| | ||||| Sbjct 11974 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 12005 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || ||||||||||||| ||||| || | || ||| | ||||| Sbjct 12022 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 12081 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || ||||| ||||| || || || || || || ||| Sbjct 12082 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 12141 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| ||| | || || || | ||||| ||| Sbjct 12142 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 12201 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | ||||| Sbjct 12202 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233 Score = 118 bits (130), Expect = 3e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| || || ||||| | ||||| |||| | ||| Sbjct 12552 ACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGT 12611 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || |||||||| || || || ||||| || || || || Sbjct 12612 ACGGCCGTCTTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCC 12671 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||| ||||| | ||||| || | Sbjct 12672 CTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAG 12731 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 12732 GGTGATGGTCTTTCCGGT 12749 >seq81 Length=63167 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 62900 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 62899 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 62841 >seq1817 Length=928 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632 || || ||||| || | |||||||||||| | |||||||| | | ||||| ||||| Sbjct 925 ACAGCTCATGCTATTATGATGATTTTCTTTATGGTTATGCCTGCATTAATAGGAGGTTTT 866 Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692 || |||| || | || ||| | |||| | |||||||||||| || || || | || Sbjct 865 GGTAATTTCTTATTACCATTATTAGTTGGAGGTCCTGATATGGCATTCCCTAGATTAAAT 806 Query 7693 AATATAAGTTTTTGATTACTA 7713 ||||| ||||| |||||| || Sbjct 805 AATATTAGTTTCTGATTATTA 785 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||| || |||||||| | |||||| | | ||||||||| || || || | Sbjct 374 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGAATAAGATAGGATCACCACCACCAGC 433 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| || |||||||||||||||||| |||||||| Sbjct 434 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAAC 475 >seq4138 Length=206 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 7579 CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAAT 7638 ||||| || | |||||||||||| | |||||||| | | ||||| ||||| || ||| Sbjct 205 CATGCTATTATGATGATTTTCTTTATGGTTATGCCTGCATTAATAGGAGGTTTTGGTAAT 146 Query 7639 TGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATA 7698 | || | || ||| | |||| | |||||||||||| || || || | || ||||| Sbjct 145 TTCTTATTACCATTATTAGTTGGAGGTCCTGATATGGCATTCCCTAGATTAAATAATATT 86 Query 7699 AGTTTTTGATTACTA 7713 ||||| |||||| || Sbjct 85 AGTTTCTGATTATTA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192467378338838